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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170566833
FLLY01006370
248041
Gammaproteobacteria
GGC
Ala
>WENV170566878
FLLY01009969
236366
Gammaproteobacteria
GTG
His
>WENV170567280
FLLY01111178
153865
Gammaproteobacteria
CCG
Arg
>WENV170567097
FLLY01046211
417674
Gammaproteobacteria
GCA
Cys
>WENV170566780
FLLY01002936
239650
Gammaproteobacteria
TGT
Thr
>WENV170567200
FLLY01080294
411842
Gammaproteobacteria
GCA
Cys
>WENV170566785
FLLY01003070
186449
Gammaproteobacteria
TGG
Pro
>WENV170566751
FLLY01001539
149661
Gammaproteobacteria
CAT
Met
>WENV170566760
FLLY01001744
237421
Gammaproteobacteria
TGT
Thr
>WENV170566860
FLLY01008425
16840
Gammaproteobacteria
GGA
Ser
>WENV170567227
FLLY01090970
270352
Gammaproteobacteria
GCC
Gly
>WENV170567124
FLLY01055436
270352
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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