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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180000678
FLNV01001022
339412
Bacteroidota
GGT
Thr
>WENV180000823
FLNV01002130
339412
Bacteroidota
GGT
Thr
>WENV180000848
FLNV01002412
339412
Bacteroidota
GGT
Thr
>WENV180000725
FLNV01001444
237796
Bacteroidota
CGT
Thr
>WENV180000782
FLNV01002053
237796
Bacteroidota
CGT
Thr
>WENV180000500
FLNV01000237
136244
Bacteroidota
TAC
Val
>WENV180000510
FLNV01000297
136244
Bacteroidota
TAC
Val
>WENV180000581
FLNV01000745
136244
Bacteroidota
TAC
Val
>WENV180000694
FLNV01001046
136244
Bacteroidota
TAC
Val
>WENV180000796
FLNV01002066
136244
Bacteroidota
TAC
Val
>WENV180000829
FLNV01002241
136244
Bacteroidota
TAC
Val
>WENV180000493
FLNV01000212
155123
Bacteroidota
GTT
Asn
>WENV180000526
FLNV01000536
155123
Bacteroidota
GTT
Asn
>WENV180000570
FLNV01000691
155123
Bacteroidota
GTT
Asn
>WENV180000586
FLNV01000762
155123
Bacteroidota
GTT
Asn
>WENV180000693
FLNV01001040
155123
Bacteroidota
GTT
Asn
>WENV180000731
FLNV01001600
155123
Bacteroidota
GTT
Asn
>WENV180000801
FLNV01002074
155123
Bacteroidota
GTT
Asn
>WENV180000743
FLNV01001623
146800
Bacteroidota
>WENV180000625
FLNV01000976
193809
Bacteroidota
CAT
Met
>WENV180000812
FLNV01002081
37076
Bacteroidota
TAA
Leu
>WENV180000815
FLNV01002084
344769
Bacteroidota
CTC
Glu
>WENV180000673
FLNV01001019
344769
Bacteroidota
CTC
Glu
>WENV180000831
FLNV01002252
415558
Bacteroidota
TTG
Gln
>WENV180000699
FLNV01001058
167013
Bacteroidota
TGG
Pro
>WENV180000783
FLNV01002053
412236
Bacteroidota
CCC
Gly
>WENV180000811
FLNV01002075
146764
Bacteroidota
GTC
Asp
>WENV180000810
FLNV01002075
146764
Bacteroidota
GTC
Asp
>WENV180000790
FLNV01002059
59498
Bacteroidota
GAG
Leu
>WENV180000689
FLNV01001036
59498
Bacteroidota
GAG
Leu
>WENV180000594
FLNV01000788
59498
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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