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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180000699
FLNV01001058
202994
Bacteroidota
TGG
Pro
>WENV180000709
FLNV01001090
369487
Bacteroidota
>WENV180000722
FLNV01001427
369487
Bacteroidota
>WENV180000784
FLNV01002055
369487
Bacteroidota
>WENV180000825
FLNV01002227
369487
Bacteroidota
>WENV180000593
FLNV01000788
105251
Bacteroidota
CAG
Leu
>WENV180000688
FLNV01001036
105251
Bacteroidota
CAG
Leu
>WENV180000789
FLNV01002059
105251
Bacteroidota
CAG
Leu
>WENV180000831
FLNV01002252
453390
Bacteroidota
TTG
Gln
>WENV180000567
FLNV01000653
175623
Bacteroidota
GTG
His
>WENV180000716
FLNV01001246
175623
Bacteroidota
GTG
His
>WENV180000575
FLNV01000731
258197
Bacteroidota
CCA
Trp
>WENV180000679
FLNV01001022
258197
Bacteroidota
CCA
Trp
>WENV180000711
FLNV01001156
258197
Bacteroidota
CCA
Trp
>WENV180000816
FLNV01002106
258197
Bacteroidota
CCA
Trp
>WENV180000573
FLNV01000731
91080
Bacteroidota
GTA
Tyr
>WENV180000677
FLNV01001022
91080
Bacteroidota
GTA
Tyr
>WENV180000779
FLNV01002052
91080
Bacteroidota
GTA
Tyr
>WENV180000822
FLNV01002130
91080
Bacteroidota
GTA
Tyr
>WENV180000847
FLNV01002412
91080
Bacteroidota
GTA
Tyr
>WENV180000493
FLNV01000212
159413
Bacteroidota
>WENV180000526
FLNV01000536
159413
Bacteroidota
>WENV180000570
FLNV01000691
159413
Bacteroidota
>WENV180000586
FLNV01000762
159413
Bacteroidota
>WENV180000693
FLNV01001040
159413
Bacteroidota
>WENV180000731
FLNV01001600
159413
Bacteroidota
>WENV180000801
FLNV01002074
159413
Bacteroidota
>WENV180000681
FLNV01001027
472284
Bacteroidota
TTG
Gln
>WENV180000729
FLNV01001541
141401
Bacteroidota
CAC
Val
>WENV180000581
FLNV01000745
138926
Bacteroidota
>WENV180000529
FLNV01000536
155049
Bacteroidota
TAC
Val
>WENV180000568
FLNV01000653
155049
Bacteroidota
TAC
Val
>WENV180000702
FLNV01001073
276085
Bacteroidota
TTT
Lys
>WENV180000625
FLNV01000976
159953
Bacteroidota
CAT
Met
>WENV180000850
FLNV01002481
49817
Bacteroidota
TGA
Ser
>WENV180000792
FLNV01002061
369489
Bacteroidota
CCT
Arg
>WENV180000842
FLNV01002300
369489
Bacteroidota
CCT
Arg
>WENV180000637
FLNV01000992
26705
Bacteroidota
GCT
Ser
>WENV180000595
FLNV01000794
159415
Bacteroidota
>WENV180000809
FLNV01002074
159415
Bacteroidota
>WENV180000826
FLNV01002234
159415
Bacteroidota
>WENV180000598
FLNV01000852
170961
Bacteroidota
CAT
Met
>WENV180000692
FLNV01001039
170961
Bacteroidota
CAT
Met
>WENV180000798
FLNV01002069
170961
Bacteroidota
CAT
Met
>WENV180000810
FLNV01002075
191331
Bacteroidota
GTC
Asp
>WENV180000811
FLNV01002075
191331
Bacteroidota
GTC
Asp
>WENV180000703
FLNV01001073
258198
Bacteroidota
GGG
Pro
>WENV180000788
FLNV01002058
258198
Bacteroidota
GGG
Pro
>WENV180000837
FLNV01002280
258198
Bacteroidota
GGG
Pro
>WENV180000673
FLNV01001019
369490
Bacteroidota
CTC
Glu
>WENV180000815
FLNV01002084
369490
Bacteroidota
CTC
Glu
>WENV180000597
FLNV01000844
258196
Bacteroidota
GAA
Phe
>WENV180000705
FLNV01001076
258196
Bacteroidota
GAA
Phe
>WENV180000794
FLNV01002065
258196
Bacteroidota
GAA
Phe
>WENV180000840
FLNV01002291
258196
Bacteroidota
GAA
Phe
>WENV180000601
FLNV01000889
105877
Bacteroidota
CAA
Leu
>WENV180000583
FLNV01000746
288453
Bacteroidota
>WENV180000695
FLNV01001047
288453
Bacteroidota
>WENV180000827
FLNV01002237
288453
Bacteroidota
>WENV180000591
FLNV01000775
453411
Bacteroidota
TTG
Gln
>WENV180000727
FLNV01001449
453411
Bacteroidota
TTG
Gln
>WENV180000793
FLNV01002062
453411
Bacteroidota
TTG
Gln
>WENV180000590
FLNV01000775
369494
Bacteroidota
CTC
Glu
>WENV180000812
FLNV01002081
41238
Bacteroidota
TAA
Leu
>WENV180000508
FLNV01000286
369491
Bacteroidota
GCA
Cys
>WENV180000690
FLNV01001037
23438
Bacteroidota
GGA
Ser
>WENV180000800
FLNV01002071
23438
Bacteroidota
GGA
Ser
>WENV180000843
FLNV01002302
23438
Bacteroidota
GGA
Ser
>WENV180000584
FLNV01000747
159414
Bacteroidota
GTG
His
>WENV180000675
FLNV01001021
159414
Bacteroidota
GTG
His
>WENV180000819
FLNV01002121
159414
Bacteroidota
GTG
His
>WENV180000678
FLNV01001022
369492
Bacteroidota
GGT
Thr
>WENV180000823
FLNV01002130
369492
Bacteroidota
GGT
Thr
>WENV180000848
FLNV01002412
369492
Bacteroidota
GGT
Thr
>WENV180000534
FLNV01000540
324834
Bacteroidota
CCC
Gly
>WENV180000594
FLNV01000788
64887
Bacteroidota
GAG
Leu
>WENV180000689
FLNV01001036
64887
Bacteroidota
GAG
Leu
>WENV180000790
FLNV01002059
64887
Bacteroidota
GAG
Leu
>WENV180000783
FLNV01002053
455740
Bacteroidota
CCC
Gly
>WENV180000814
FLNV01002084
30978
Bacteroidota
GCT
Ser
>WENV180000725
FLNV01001444
275590
Bacteroidota
CGT
Thr
>WENV180000782
FLNV01002053
275590
Bacteroidota
CGT
Thr
>WENV180000829
FLNV01002241
142268
Bacteroidota
TAC
Val
>WENV180000588
FLNV01000773
308550
Bacteroidota
CCC
Gly
>WENV180000726
FLNV01001444
308550
Bacteroidota
CCC
Gly
>WENV180000712
FLNV01001164
258200
Bacteroidota
TGG
Pro
>WENV180000818
FLNV01002120
258200
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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