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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180009871
FLSC01135774
177790
Unclassified
GCG
Arg
>WENV180010214
FLSC01416501
177790
Unclassified
GCG
Arg
>WENV180010028
FLSC01242204
187848
Unclassified
CAC
Val
>WENV180009689
FLSC01046136
173051
Unclassified
GAT
Ile
>WENV180009765
FLSC01076727
28829
Unclassified
TGA
Ser
>WENV180009764
FLSC01076727
8701
Unclassified
GCT
Ser
>WENV180010013
FLSC01226153
176862
Unclassified
CAT
Met
>WENV180009688
FLSC01046136
171433
Unclassified
TGC
Ala
>WENV180009281
FLSC01000435
68765
Unclassified
CAG
Leu
>WENV180009449
FLSC01002910
381578
Unclassified
GTT
Asn
>WENV180009586
FLSC01018850
319986
Unclassified
GGT
Thr
>WENV180009972
FLSC01207009
68764
Unclassified
CAA
Leu
>WENV180009941
FLSC01187707
278008
Unclassified
CGT
Thr
>WENV180009546
FLSC01011131
176866
Unclassified
GAC
Val
>WENV180010302
FLSC01463134
382159
Unclassified
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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