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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180031410
FTJO01064078
238438
Gammaproteobacteria
>WENV180031262
FTJO01011381
412176
Gammaproteobacteria
CCC
Gly
>WENV180031128
FTJO01005926
235321
Gammaproteobacteria
CGC
Ala
>WENV180031275
FTJO01011753
235321
Gammaproteobacteria
CGC
Ala
>WENV180031294
FTJO01012917
235321
Gammaproteobacteria
CGC
Ala
>WENV180031303
FTJO01014133
235321
Gammaproteobacteria
CGC
Ala
>WENV180031493
FTJO01199278
235321
Gammaproteobacteria
CGC
Ala
>WENV180031453
FTJO01135197
235339
Gammaproteobacteria
GTG
His
>WENV180031560
FTJO01372149
235339
Gammaproteobacteria
GTG
His
>WENV180031205
FTJO01009226
17108
Gammaproteobacteria
GCT
Ser
>WENV180031515
FTJO01240434
247088
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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