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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170676773
LDZS01002199
25916
Thermotogota
GCT
Ser
>WENV170676750
LDZS01002150
62836
Thermotogota
CAA
Leu
>WENV170676766
LDZS01002191
351605
Thermotogota
CCT
Arg
>WENV170676761
LDZS01002182
417746
Thermotogota
CTG
Gln
>WENV170676753
LDZS01002155
256128
Thermotogota
CAT
Met
>WENV170676762
LDZS01002186
145413
Thermotogota
TGG
Pro
>WENV170676545
LDZS01001172
60196
Thermotogota
TAG
Leu
>WENV170676949
LDZS01003355
338581
Thermotogota
CTC
Glu
>WENV170676755
LDZS01002155
62837
Thermotogota
GTA
Tyr
>WENV170676757
LDZS01002159
165915
Thermotogota
GAT
Ile
>WENV170676756
LDZS01002155
256130
Thermotogota
CCA
Trp
>WENV170676769
LDZS01002199
237405
Thermotogota
TCC
Gly
>WENV170676752
LDZS01002155
256127
Thermotogota
CAT
Met
>WENV170676780
LDZS01002335
127892
Thermotogota
GTC
Asp
>WENV170676952
LDZS01003368
235940
Thermotogota
TGT
Thr
>WENV170676748
LDZS01002141
256125
Thermotogota
CGT
Thr
>WENV170676954
LDZS01003377
242702
Thermotogota
TTG
Gln
>WENV170676775
LDZS01002220
25915
Thermotogota
TAA
Leu
>WENV170676771
LDZS01002199
256131
Thermotogota
GTG
His
>WENV170676961
LDZS01003640
145265
Thermotogota
CAT
Met
>WENV170676537
LDZS01000971
235938
Thermotogota
TTC
Glu
>WENV170676749
LDZS01002146
256123
Thermotogota
GTT
Asn
>WENV170676764
LDZS01002191
235939
Thermotogota
GAA
Phe
>WENV170676772
LDZS01002199
146778
Thermotogota
TCG
Arg
>WENV170676751
LDZS01002154
351606
Thermotogota
CAC
Val
>WENV170676758
LDZS01002159
235948
Thermotogota
TGC
Ala
>WENV170676782
LDZS01002342
256121
Thermotogota
>WENV170676765
LDZS01002191
256121
Thermotogota
>WENV170676544
LDZS01001172
256126
Thermotogota
TTT
Lys
>WENV170676767
LDZS01002191
256122
Thermotogota
CTT
Lys
>WENV170676776
LDZS01002228
37113
Thermotogota
>WENV170676754
LDZS01002155
256129
Thermotogota
TGT
Thr
>WENV170676779
LDZS01002322
256124
Thermotogota
CCC
Gly
>WENV170676770
LDZS01002199
163781
Thermotogota
TCT
Arg
>WENV170676760
LDZS01002164
145412
Thermotogota
GGT
Thr
>WENV170676778
LDZS01002322
147393
Thermotogota
CAT
Met
>WENV170676777
LDZS01002320
147393
Thermotogota
CAT
Met
>WENV170676511
LDZS01000383
147393
Thermotogota
CAT
Met
>WENV170676781
LDZS01002337
16373
Thermotogota
GGA
Ser
>WENV170676747
LDZS01002139
417745
Thermotogota
TTG
Gln
>WENV170676774
LDZS01002199
163782
Thermotogota
GCG
Arg
>WENV170676768
LDZS01002193
163779
Thermotogota
GCA
Cys
>WENV170676759
LDZS01002161
256120
Thermotogota
CCG
Arg
>WENV170676948
LDZS01003351
411746
Thermotogota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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