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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170756514
LUMP01000052
411842
Gammaproteobacteria
GCA
Cys
>WENV170756513
LUMP01000052
270352
Gammaproteobacteria
GCC
Gly
>WENV170756530
LUMP01000071
247974
Gammaproteobacteria
CCA
Trp
>WENV170756625
LUMP01000300
152301
Gammaproteobacteria
GAT
Ile
>WENV170756723
LUMP01000691
312287
Gammaproteobacteria
TGT
Thr
>WENV170756729
LUMP01000752
153865
Gammaproteobacteria
CCG
Arg
>WENV170756906
LUMP01004564
322642
Gammaproteobacteria
GGT
Thr
>WENV170757044
LUMP01016302
245602
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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