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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170921402
MDTG01013546
236112
Betaproteobacteria
GAA
Phe
>WENV170922545
MDTG01032888
236112
Betaproteobacteria
GAA
Phe
>WENV170933881
MDTG01228213
236112
Betaproteobacteria
GAA
Phe
>WENV170934099
MDTG01232379
236112
Betaproteobacteria
GAA
Phe
>WENV170935323
MDTG01254652
236112
Betaproteobacteria
GAA
Phe
>WENV170941303
MDTG01358179
236112
Betaproteobacteria
GAA
Phe
>WENV170927268
MDTG01114434
239248
Betaproteobacteria
TGT
Thr
>WENV170927415
MDTG01116825
239248
Betaproteobacteria
TGT
Thr
>WENV170931104
MDTG01178756
239248
Betaproteobacteria
TGT
Thr
>WENV170932671
MDTG01206841
256728
Betaproteobacteria
GTT
Asn
>WENV170922103
MDTG01025657
160841
Betaproteobacteria
TTG
Gln
>WENV170939981
MDTG01335279
160841
Betaproteobacteria
TTG
Gln
>WENV170943334
MDTG01395067
160841
Betaproteobacteria
TTG
Gln
>WENV170932890
MDTG01211447
162620
Betaproteobacteria
ACG
Arg
>WENV170938479
MDTG01309852
162620
Betaproteobacteria
ACG
Arg
>WENV170923861
MDTG01056266
236872
Betaproteobacteria
CCA
Trp
>WENV170941677
MDTG01364203
238002
Betaproteobacteria
GCC
Gly
>WENV170940200
MDTG01339341
238002
Betaproteobacteria
GCC
Gly
>WENV170921302
MDTG01011738
238002
Betaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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