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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180048795
MPLU02011277
133273
Nitrososphaerota
TAC
Val
>WENV180048976
MPLU02024657
151807
Nitrososphaerota
GCC
Gly
>WENV180049316
MPLU02051214
128889
Nitrososphaerota
GAT
Ile
>WENV180049662
MPLU02075565
151807
Nitrososphaerota
GCC
Gly
>WENV180049725
MPLU02081372
365061
Nitrososphaerota
GTG
His
>WENV180049770
MPLU02083858
145604
Nitrososphaerota
TCC
Gly
>WENV180050166
MPLU02115157
351522
Nitrososphaerota
>WENV180050209
MPLU02118572
145604
Nitrososphaerota
TCC
Gly
>WENV180050339
MPLU02129655
185587
Nitrososphaerota
CAT
Met
>WENV180050496
MPLU02144846
145604
Nitrososphaerota
TCC
Gly
>WENV180050771
MPLU02167606
351522
Nitrososphaerota
>WENV180051531
MPLU02221640
145604
Nitrososphaerota
TCC
Gly
>WENV180052110
MPLU02269895
151807
Nitrososphaerota
GCC
Gly
>WENV180052236
MPLU02279226
61752
Nitrososphaerota
TGA
Ser
>WENV180052546
MPLU02306998
145599
Nitrososphaerota
GGC
Ala
>WENV180052612
MPLU02312252
365061
Nitrososphaerota
GTG
His
>WENV180053055
MPLU02342284
145604
Nitrososphaerota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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