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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180053373
MPLV02012628
325641
Gammaproteobacteria
CCA
Trp
>WENV180053686
MPLV02035610
65736
Gammaproteobacteria
TAA
Leu
>WENV180053852
MPLV02049319
230238
Gammaproteobacteria
TGG
Pro
>WENV180054440
MPLV02090740
225112
Gammaproteobacteria
GAT
Ile
>WENV180055110
MPLV02136715
265381
Gammaproteobacteria
GTT
Asn
>WENV180055131
MPLV02138295
319314
Gammaproteobacteria
TGT
Thr
>WENV180055516
MPLV02165346
316726
Gammaproteobacteria
TTC
Glu
>WENV180055595
MPLV02170228
263347
Gammaproteobacteria
TTT
Lys
>WENV180055780
MPLV02181763
105812
Gammaproteobacteria
GTA
Tyr
>WENV180055956
MPLV02193927
159335
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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