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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170963077
MRWG01000008
411784
Bacteroidota
GCA
Cys
>WENV170964015
MRWG01001977
411784
Bacteroidota
GCA
Cys
>WENV170963174
MRWG01000026
148134
Bacteroidota
GGC
Ala
>WENV170964197
MRWG01004662
163866
Bacteroidota
TCG
Arg
>WENV170963186
MRWG01000033
238765
Bacteroidota
GCC
Gly
>WENV170963456
MRWG01000197
236125
Bacteroidota
GAA
Phe
>WENV170963952
MRWG01001557
236125
Bacteroidota
GAA
Phe
>WENV170963078
MRWG01000008
160686
Bacteroidota
CAT
Met
>WENV170963794
MRWG01000790
160686
Bacteroidota
CAT
Met
>WENV170963418
MRWG01000172
17496
Bacteroidota
GGA
Ser
>WENV170964565
MRWG01019420
47173
Bacteroidota
TGA
Ser
>WENV170963201
MRWG01000037
47173
Bacteroidota
TGA
Ser
>WENV170963196
MRWG01000035
126712
Bacteroidota
GAC
Val
>WENV170963190
MRWG01000033
80676
Bacteroidota
GTA
Tyr
>WENV170963838
MRWG01000932
148135
Bacteroidota
GGG
Pro
>WENV170963751
MRWG01000645
148135
Bacteroidota
GGG
Pro
>WENV170963692
MRWG01000521
342872
Bacteroidota
GGT
Thr
>WENV170963739
MRWG01000632
145555
Bacteroidota
GTC
Asp
>WENV170963349
MRWG01000120
145555
Bacteroidota
GTC
Asp
>WENV170963960
MRWG01001612
240901
Bacteroidota
TTT
Lys
>WENV170963385
MRWG01000149
145507
Bacteroidota
TCT
Arg
>WENV170963356
MRWG01000127
59413
Bacteroidota
GCT
Ser
>WENV170963869
MRWG01001075
59413
Bacteroidota
GCT
Ser
>WENV170963991
MRWG01001791
255845
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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