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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171002493
NHNJ01058542
373624
Cyanobacteriota
TTG
Gln
>WENV171002592
NHNJ01092123
373624
Cyanobacteriota
TTG
Gln
>WENV171002548
NHNJ01083925
237009
Cyanobacteriota
GGC
Ala
>WENV171002566
NHNJ01086978
237009
Cyanobacteriota
GGC
Ala
>WENV171002820
NHNJ01175895
237009
Cyanobacteriota
GGC
Ala
>WENV171002903
NHNJ01201518
237009
Cyanobacteriota
GGC
Ala
>WENV171002826
NHNJ01176743
162341
Cyanobacteriota
TCT
Arg
>WENV171002550
NHNJ01084111
339686
Cyanobacteriota
TAC
Val
>WENV171002479
NHNJ01050485
349164
Cyanobacteriota
TGT
Thr
>WENV171002816
NHNJ01175206
349164
Cyanobacteriota
TGT
Thr
>WENV171002794
NHNJ01172361
363933
Cyanobacteriota
GTT
Asn
>WENV171002480
NHNJ01051029
153717
Cyanobacteriota
CAT
Met
>WENV171002460
NHNJ01045641
153717
Cyanobacteriota
CAT
Met
>WENV171002330
NHNJ01000470
153717
Cyanobacteriota
CAT
Met
>WENV171002744
NHNJ01144537
153717
Cyanobacteriota
CAT
Met
>WENV171002714
NHNJ01138783
153717
Cyanobacteriota
CAT
Met
>WENV171002817
NHNJ01175243
344607
Cyanobacteriota
CCC
Gly
>WENV171002629
NHNJ01108725
339688
Cyanobacteriota
GAC
Val
>WENV171002542
NHNJ01083023
11030
Cyanobacteriota
GCT
Ser
>WENV171002468
NHNJ01047521
379587
Cyanobacteriota
GTT
Asn
>WENV171002798
NHNJ01173258
379587
Cyanobacteriota
GTT
Asn
>WENV171002748
NHNJ01145886
379587
Cyanobacteriota
GTT
Asn
>WENV171002740
NHNJ01143103
379587
Cyanobacteriota
GTT
Asn
>WENV171002661
NHNJ01125251
379587
Cyanobacteriota
GTT
Asn
>WENV171002483
NHNJ01052855
147238
Cyanobacteriota
CCG
Arg
>WENV171002481
NHNJ01051481
147238
Cyanobacteriota
CCG
Arg
>WENV171002466
NHNJ01045981
275071
Cyanobacteriota
CCA
Trp
>WENV171002749
NHNJ01146207
275071
Cyanobacteriota
CCA
Trp
>WENV171002634
NHNJ01110254
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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