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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180099470
NMRC01006994
24760
Alphaproteobacteria
TGA
Ser
>WENV180099542
NMRC01015775
24760
Alphaproteobacteria
TGA
Ser
>WENV180099388
NMRC01000852
412917
Alphaproteobacteria
TCC
Gly
>WENV180099390
NMRC01001098
375044
Alphaproteobacteria
GCC
Gly
>WENV180099631
NMRC01022014
375044
Alphaproteobacteria
GCC
Gly
>WENV180099508
NMRC01010263
199776
Alphaproteobacteria
CGG
Pro
>WENV180099561
NMRC01017497
95928
Alphaproteobacteria
TAG
Leu
>WENV180099579
NMRC01019201
352395
Alphaproteobacteria
CAC
Val
>WENV180099514
NMRC01010529
259072
Alphaproteobacteria
CGC
Ala
>WENV180099515
NMRC01010643
62052
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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