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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180113017
OAPQ01000107
279385
Gammaproteobacteria
TTT
Lys
>WENV180113060
OAPQ01000801
46594
Gammaproteobacteria
GGA
Ser
>WENV180113064
OAPQ01000839
154268
Gammaproteobacteria
ACG
Arg
>WENV180113020
OAPQ01000138
148148
Gammaproteobacteria
GAC
Val
>WENV180113334
OAPQ01033912
145261
Gammaproteobacteria
CAT
Met
>WENV180113132
OAPQ01003688
236248
Gammaproteobacteria
TTT
Lys
>WENV180113030
OAPQ01000235
243485
Gammaproteobacteria
TGT
Thr
>WENV180113455
OAPQ01089304
237421
Gammaproteobacteria
TGT
Thr
>WENV180113536
OAPQ01148326
288001
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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