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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180136460
OATN01000010
448691
Bacteroidota
TTG
Gln
>WENV180136850
OATN01016120
369581
Bacteroidota
>WENV180136552
OATN01000079
258780
Bacteroidota
>WENV180136833
OATN01011891
160416
Bacteroidota
GTG
His
>WENV180136774
OATN01002374
65110
Bacteroidota
CAG
Leu
>WENV180136870
OATN01030579
182139
Bacteroidota
CGG
Pro
>WENV180136428
OATN01000003
144955
Bacteroidota
GGG
Pro
>WENV180136826
OATN01009174
65111
Bacteroidota
CAA
Leu
>WENV180136462
OATN01000011
374505
Bacteroidota
CTC
Glu
>WENV180136813
OATN01006244
370665
Bacteroidota
CCG
Arg
>WENV180136442
OATN01000005
259302
Bacteroidota
>WENV180136775
OATN01002374
71334
Bacteroidota
GAG
Leu
>WENV180136764
OATN01001577
259272
Bacteroidota
CGT
Thr
>WENV180136763
OATN01001577
160417
Bacteroidota
GGC
Ala
>WENV180136874
OATN01031944
288732
Bacteroidota
CTT
Lys
>WENV180136818
OATN01007187
448600
Bacteroidota
CTG
Gln
>WENV180136539
OATN01000068
143497
Bacteroidota
TGG
Pro
>WENV180136453
OATN01000008
54039
Bacteroidota
TGA
Ser
>WENV180136454
OATN01000008
54039
Bacteroidota
TGA
Ser
>WENV180136862
OATN01021212
293859
Bacteroidota
CCA
Trp
>WENV180136513
OATN01000042
160458
Bacteroidota
>WENV180136479
OATN01000019
193541
Bacteroidota
GTT
Asn
>WENV180136480
OATN01000019
193541
Bacteroidota
GTT
Asn
>WENV180136834
OATN01012228
95591
Bacteroidota
GTA
Tyr
>WENV180136766
OATN01001725
142773
Bacteroidota
TGG
Pro
>WENV180136481
OATN01000020
160459
Bacteroidota
GGC
Ala
>WENV180136769
OATN01001821
448601
Bacteroidota
TTG
Gln
>WENV180136815
OATN01006368
294337
Bacteroidota
CCC
Gly
>WENV180136478
OATN01000019
370351
Bacteroidota
CCT
Arg
>WENV180136780
OATN01002588
18452
Bacteroidota
GGA
Ser
>WENV180136840
OATN01014123
30330
Bacteroidota
CGA
Ser
>WENV180136794
OATN01003532
105282
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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