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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180146460
OAUF01000398
24650
Bacillota
TAA
Leu
>WENV180146189
OAUF01000015
267649
Bacillota
TAC
Val
>WENV180146191
OAUF01000015
267649
Bacillota
TAC
Val
>WENV180146358
OAUF01000196
267649
Bacillota
TAC
Val
>WENV180146802
OAUF01012072
338143
Bacillota
CTC
Glu
>WENV180146405
OAUF01000289
16524
Bacillota
CGA
Ser
>WENV180146357
OAUF01000196
144668
Bacillota
GTC
Asp
>WENV180146458
OAUF01000398
144668
Bacillota
GTC
Asp
>WENV180146635
OAUF01001685
429429
Bacillota
CCA
Trp
>WENV180146362
OAUF01000196
313454
Bacillota
GAA
Phe
>WENV180146788
OAUF01009599
16834
Bacillota
GCT
Ser
>WENV180146812
OAUF01016775
147135
Bacillota
ACG
Arg
>WENV180146789
OAUF01009612
342895
Bacillota
CAT
Met
>WENV180146363
OAUF01000196
313164
Bacillota
TTT
Lys
>WENV180146170
OAUF01000010
313164
Bacillota
TTT
Lys
>WENV180146827
OAUF01026972
109476
Bacillota
TAG
Leu
>WENV180146755
OAUF01006030
314670
Bacillota
GAA
Phe
>WENV180146834
OAUF01029995
235197
Bacillota
GTC
Asp
>WENV180146167
OAUF01000010
147674
Bacillota
TCT
Arg
>WENV180146668
OAUF01002329
320668
Bacillota
CTT
Lys
>WENV180146239
OAUF01000054
1100
Bacillota
>WENV180146719
OAUF01003905
273029
Bacillota
TGT
Thr
>WENV180146568
OAUF01000899
420471
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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