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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180189419
OAWY01000052
59076
Bacillota
CAG
Leu
>WENV180189458
OAWY01000103
146681
Bacillota
TCT
Arg
>WENV180189418
OAWY01000052
126706
Bacillota
GTC
Asp
>WENV180189493
OAWY01000149
126706
Bacillota
GTC
Asp
>WENV180189499
OAWY01000149
126706
Bacillota
GTC
Asp
>WENV180189496
OAWY01000149
16358
Bacillota
GCT
Ser
>WENV180189741
OAWY01001548
339354
Bacillota
TTG
Gln
>WENV180189572
OAWY01000383
296559
Bacillota
GTT
Asn
>WENV180189421
OAWY01000053
412264
Bacillota
TCC
Gly
>WENV180189482
OAWY01000149
237265
Bacillota
TAC
Val
>WENV180189376
OAWY01000010
237268
Bacillota
CGC
Ala
>WENV180189484
OAWY01000149
238211
Bacillota
TGT
Thr
>WENV180189428
OAWY01000057
16359
Bacillota
CGA
Ser
>WENV180189483
OAWY01000149
237271
Bacillota
TTT
Lys
>WENV180189696
OAWY01001100
80836
Bacillota
GTA
Tyr
>WENV180189743
OAWY01001548
45092
Bacillota
CAA
Leu
>WENV180189695
OAWY01001100
237262
Bacillota
CGT
Thr
>WENV180189694
OAWY01001100
237261
Bacillota
GTT
Asn
>WENV180189505
OAWY01000162
45091
Bacillota
AAG
Leu
>WENV180189536
OAWY01000229
339355
Bacillota
CCG
Arg
>WENV180189422
OAWY01000053
237267
Bacillota
CTG
Gln
>WENV180189420
OAWY01000052
237266
Bacillota
GTG
His
>WENV180189961
OAWY01015389
9240
Bacillota
GGA
Ser
>WENV180189494
OAWY01000149
314670
Bacillota
GAA
Phe
>WENV180189697
OAWY01001100
339352
Bacillota
TTG
Gln
>WENV180189489
OAWY01000149
146741
Bacillota
CAT
Met
>WENV180189497
OAWY01000149
237264
Bacillota
TTC
Glu
>WENV180189553
OAWY01000295
339353
Bacillota
GTT
Asn
>WENV180189491
OAWY01000149
6950
Bacillota
TGA
Ser
>WENV180189487
OAWY01000149
145468
Bacillota
ACG
Arg
>WENV180189424
OAWY01000053
237908
Bacillota
>WENV180189705
OAWY01001173
237263
Bacillota
AGT
Thr
>WENV180189573
OAWY01000383
339692
Bacillota
>WENV180189425
OAWY01000053
339692
Bacillota
>WENV180189704
OAWY01001173
95877
Bacillota
TAG
Leu
>WENV180189566
OAWY01000347
237269
Bacillota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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