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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180246317
OBDN01118591
119661
Verrucomicrobiota
CAA
Leu
>WENV180246401
OBDN01201885
246677
Verrucomicrobiota
CTT
Lys
>WENV180246343
OBDN01142590
414625
Verrucomicrobiota
CCC
Gly
>WENV180246316
OBDN01117215
246700
Verrucomicrobiota
TTC
Glu
>WENV180246235
OBDN01054056
246687
Verrucomicrobiota
CGC
Ala
>WENV180246204
OBDN01044701
60880
Verrucomicrobiota
CAG
Leu
>WENV180246145
OBDN01028150
344842
Verrucomicrobiota
CGT
Thr
>WENV180246015
OBDN01011219
170105
Verrucomicrobiota
CAT
Met
>WENV180246079
OBDN01017388
287733
Verrucomicrobiota
CCA
Trp
>WENV180246273
OBDN01077733
344839
Verrucomicrobiota
GTG
His
>WENV180246298
OBDN01099204
82181
Verrucomicrobiota
AAG
Leu
>WENV180246157
OBDN01030152
345115
Verrucomicrobiota
CAT
Met
>WENV180246142
OBDN01027878
368497
Verrucomicrobiota
GCC
Gly
>WENV180246144
OBDN01028107
345142
Verrucomicrobiota
CCG
Arg
>WENV180246150
OBDN01029297
246709
Verrucomicrobiota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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