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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180290736
OBIU01085433
235102
Bacteroidota
CGT
Thr
>WENV180290081
OBIU01002131
243025
Bacteroidota
CAT
Met
>WENV180290523
OBIU01032317
17323
Bacteroidota
GGA
Ser
>WENV180290922
OBIU01165907
237797
Bacteroidota
CCA
Trp
>WENV180290789
OBIU01110365
338132
Bacteroidota
GCA
Cys
>WENV180290764
OBIU01093873
301449
Bacteroidota
CGG
Pro
>WENV180290511
OBIU01030485
235207
Bacteroidota
CAT
Met
>WENV180290716
OBIU01078433
143169
Bacteroidota
GGG
Pro
>WENV180290933
OBIU01172142
344769
Bacteroidota
CTC
Glu
>WENV180290563
OBIU01039926
154643
Bacteroidota
CAT
Met
>WENV180290651
OBIU01060010
95559
Bacteroidota
TAG
Leu
>WENV180290446
OBIU01022624
44852
Bacteroidota
TAA
Leu
>WENV180290786
OBIU01106960
94703
Bacteroidota
GTA
Tyr
>WENV180290881
OBIU01145477
353927
Bacteroidota
TTC
Glu
>WENV180290075
OBIU01001963
414426
Bacteroidota
CTG
Gln
>WENV180290729
OBIU01082223
56823
Bacteroidota
TGA
Ser
>WENV180290760
OBIU01092684
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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