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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180356787
OBNL01028082
80917
Alphaproteobacteria
CAG
Leu
>WENV180356807
OBNL01034254
113700
Alphaproteobacteria
>WENV180356666
OBNL01005758
95611
Alphaproteobacteria
TAG
Leu
>WENV180356849
OBNL01053166
23671
Alphaproteobacteria
CGA
Ser
>WENV180356826
OBNL01040575
338282
Alphaproteobacteria
GTT
Asn
>WENV180356709
OBNL01011342
147083
Alphaproteobacteria
GGG
Pro
>WENV180356695
OBNL01008865
147879
Alphaproteobacteria
TGG
Pro
>WENV180356770
OBNL01021761
340106
Alphaproteobacteria
GCC
Gly
>WENV180356615
OBNL01000853
338760
Alphaproteobacteria
GAA
Phe
>WENV180356670
OBNL01006385
147283
Alphaproteobacteria
GTG
His
>WENV180356639
OBNL01002908
338287
Alphaproteobacteria
GGT
Thr
>WENV180356638
OBNL01002854
338287
Alphaproteobacteria
GGT
Thr
>WENV180356735
OBNL01013981
412424
Alphaproteobacteria
TCC
Gly
>WENV180356658
OBNL01004884
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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