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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180383604
OBOV01001965
113700
Alphaproteobacteria
>WENV180383789
OBOV01024561
338282
Alphaproteobacteria
GTT
Asn
>WENV180383697
OBOV01008506
113716
Alphaproteobacteria
CAA
Leu
>WENV180383536
OBOV01000060
340106
Alphaproteobacteria
GCC
Gly
>WENV180383627
OBOV01003065
340106
Alphaproteobacteria
GCC
Gly
>WENV180383791
OBOV01025675
341164
Alphaproteobacteria
GCC
Gly
>WENV180383916
OBOV01076625
23648
Alphaproteobacteria
CGA
Ser
>WENV180383593
OBOV01001412
344517
Alphaproteobacteria
GTT
Asn
>WENV180383670
OBOV01005689
147283
Alphaproteobacteria
GTG
His
>WENV180383685
OBOV01006514
338287
Alphaproteobacteria
GGT
Thr
>WENV180383613
OBOV01002478
154227
Alphaproteobacteria
CAT
Met
>WENV180383686
OBOV01006790
412424
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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