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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180405250
OBTM01000127
95987
Bacteroidota
CAA
Leu
>WENV180405282
OBTM01000461
95987
Bacteroidota
CAA
Leu
>WENV180405410
OBTM01004334
95987
Bacteroidota
CAA
Leu
>WENV180405466
OBTM01011106
95987
Bacteroidota
CAA
Leu
>WENV180405362
OBTM01002579
339412
Bacteroidota
GGT
Thr
>WENV180405279
OBTM01000396
237796
Bacteroidota
CGT
Thr
>WENV180405484
OBTM01013778
237796
Bacteroidota
CGT
Thr
>WENV180405232
OBTM01000066
97336
Bacteroidota
CAG
Leu
>WENV180405458
OBTM01009168
97336
Bacteroidota
CAG
Leu
>WENV180405294
OBTM01000766
340120
Bacteroidota
CCT
Arg
>WENV180405773
OBTM01128941
394247
Bacteroidota
CTC
Glu
>WENV180405785
OBTM01132214
394247
Bacteroidota
CTC
Glu
>WENV180405784
OBTM01132071
413663
Bacteroidota
CTG
Gln
>WENV180405270
OBTM01000334
413663
Bacteroidota
CTG
Gln
>WENV180405269
OBTM01000334
413663
Bacteroidota
CTG
Gln
>WENV180405483
OBTM01013715
136244
Bacteroidota
TAC
Val
>WENV180405482
OBTM01013669
136244
Bacteroidota
TAC
Val
>WENV180405358
OBTM01002533
237797
Bacteroidota
CCA
Trp
>WENV180405251
OBTM01000134
144695
Bacteroidota
CAT
Met
>WENV180405265
OBTM01000298
412479
Bacteroidota
TTG
Gln
>WENV180405225
OBTM01000041
412479
Bacteroidota
TTG
Gln
>WENV180405629
OBTM01052776
147147
Bacteroidota
GTG
His
>WENV180405550
OBTM01027785
147147
Bacteroidota
GTG
His
>WENV180405216
OBTM01000010
147147
Bacteroidota
GTG
His
>WENV180405764
OBTM01124775
238810
Bacteroidota
CGG
Pro
>WENV180405231
OBTM01000058
193809
Bacteroidota
CAT
Met
>WENV180405388
OBTM01003710
37076
Bacteroidota
TAA
Leu
>WENV180405261
OBTM01000270
37076
Bacteroidota
TAA
Leu
>WENV180405215
OBTM01000008
37076
Bacteroidota
TAA
Leu
>WENV180405441
OBTM01007568
251266
Bacteroidota
CTT
Lys
>WENV180405237
OBTM01000076
251266
Bacteroidota
CTT
Lys
>WENV180405257
OBTM01000218
143169
Bacteroidota
GGG
Pro
>WENV180405452
OBTM01008748
344769
Bacteroidota
CTC
Glu
>WENV180405745
OBTM01110458
147148
Bacteroidota
CAT
Met
>WENV180405293
OBTM01000714
415558
Bacteroidota
TTG
Gln
>WENV180405743
OBTM01110269
175704
Bacteroidota
TGC
Ala
>WENV180405683
OBTM01072181
175704
Bacteroidota
TGC
Ala
>WENV180405778
OBTM01129464
144590
Bacteroidota
GTT
Asn
>WENV180405572
OBTM01035216
151121
Bacteroidota
CAT
Met
>WENV180405781
OBTM01131924
196394
Bacteroidota
GTC
Asp
>WENV180405374
OBTM01003069
196394
Bacteroidota
GTC
Asp
>WENV180405271
OBTM01000336
196394
Bacteroidota
GTC
Asp
>WENV180405240
OBTM01000076
196394
Bacteroidota
GTC
Asp
>WENV180405239
OBTM01000076
196394
Bacteroidota
GTC
Asp
>WENV180405238
OBTM01000076
196394
Bacteroidota
GTC
Asp
>WENV180405311
OBTM01000846
94703
Bacteroidota
GTA
Tyr
>WENV180405435
OBTM01006992
146762
Bacteroidota
TGG
Pro
>WENV180405236
OBTM01000074
412236
Bacteroidota
CCC
Gly
>WENV180405754
OBTM01116060
59498
Bacteroidota
GAG
Leu
>WENV180405604
OBTM01044967
127023
Bacteroidota
GGG
Pro
>WENV180405416
OBTM01005173
313363
Bacteroidota
GAA
Phe
>WENV180405391
OBTM01003857
313363
Bacteroidota
GAA
Phe
>WENV180405348
OBTM01002043
313363
Bacteroidota
GAA
Phe
>WENV180405222
OBTM01000033
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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