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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180454438
OBXN01000001
235097
Bacteroidota
TTT
Lys
>WENV180454476
OBXN01000009
235097
Bacteroidota
TTT
Lys
>WENV180454442
OBXN01000002
235102
Bacteroidota
CGT
Thr
>WENV180454563
OBXN01000066
343138
Bacteroidota
CCT
Arg
>WENV180454555
OBXN01000061
415410
Bacteroidota
TTG
Gln
>WENV180454483
OBXN01000011
338124
Bacteroidota
CCG
Arg
>WENV180454485
OBXN01000013
338132
Bacteroidota
GCA
Cys
>WENV180454453
OBXN01000003
144656
Bacteroidota
GTG
His
>WENV180454506
OBXN01000024
235207
Bacteroidota
CAT
Met
>WENV180454463
OBXN01000007
80607
Bacteroidota
GTA
Tyr
>WENV180454440
OBXN01000001
80607
Bacteroidota
GTA
Tyr
>WENV180454495
OBXN01000019
113604
Bacteroidota
>WENV180454467
OBXN01000007
144590
Bacteroidota
GTT
Asn
>WENV180454466
OBXN01000007
144590
Bacteroidota
GTT
Asn
>WENV180454570
OBXN01000072
95559
Bacteroidota
TAG
Leu
>WENV180454557
OBXN01000062
144655
Bacteroidota
GGC
Ala
>WENV180454461
OBXN01000007
44852
Bacteroidota
TAA
Leu
>WENV180454489
OBXN01000015
16220
Bacteroidota
GGA
Ser
>WENV180454456
OBXN01000004
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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