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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180529003
OCHJ01057772
235146
Actinomycetota
CGT
Thr
>WENV180528675
OCHJ01013268
245301
Actinomycetota
GCC
Gly
>WENV180529204
OCHJ01129970
356045
Actinomycetota
GAC
Val
>WENV180528465
OCHJ01005236
153948
Actinomycetota
GGG
Pro
>WENV180529046
OCHJ01075149
37212
Actinomycetota
GAG
Leu
>WENV180528904
OCHJ01040142
44862
Actinomycetota
CGA
Ser
>WENV180529202
OCHJ01129857
238473
Actinomycetota
GTG
His
>WENV180528212
OCHJ01002001
144636
Actinomycetota
GAT
Ile
>WENV180528844
OCHJ01029564
243671
Actinomycetota
CTC
Glu
>WENV180528649
OCHJ01011617
338139
Actinomycetota
GTT
Asn
>WENV180528421
OCHJ01004117
414234
Actinomycetota
CTG
Gln
>WENV180528777
OCHJ01020906
47164
Actinomycetota
GGA
Ser
>WENV180528568
OCHJ01008139
61501
Actinomycetota
CAG
Leu
>WENV180529131
OCHJ01101336
80622
Actinomycetota
CAG
Leu
>WENV180529069
OCHJ01081598
158513
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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