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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180540460
OCHQ01043272
235097
Bacteroidota
TTT
Lys
>WENV180540557
OCHQ01066098
235102
Bacteroidota
CGT
Thr
>WENV180540768
OCHQ01187133
237796
Bacteroidota
CGT
Thr
>WENV180540659
OCHQ01102591
338155
Bacteroidota
CTC
Glu
>WENV180540672
OCHQ01107319
338155
Bacteroidota
CTC
Glu
>WENV180540187
OCHQ01001441
339341
Bacteroidota
GGT
Thr
>WENV180540755
OCHQ01173903
95618
Bacteroidota
TAG
Leu
>WENV180540236
OCHQ01006936
338486
Bacteroidota
CAT
Met
>WENV180540243
OCHQ01008072
415410
Bacteroidota
TTG
Gln
>WENV180540714
OCHQ01135681
238121
Bacteroidota
CTT
Lys
>WENV180540799
OCHQ01207244
338132
Bacteroidota
GCA
Cys
>WENV180540715
OCHQ01135681
45423
Bacteroidota
TGA
Ser
>WENV180540247
OCHQ01009426
149691
Bacteroidota
GTT
Asn
>WENV180540605
OCHQ01079532
235207
Bacteroidota
CAT
Met
>WENV180540749
OCHQ01165295
144659
Bacteroidota
GTG
His
>WENV180540213
OCHQ01004202
80607
Bacteroidota
GTA
Tyr
>WENV180540713
OCHQ01134442
113604
Bacteroidota
>WENV180540369
OCHQ01029807
113604
Bacteroidota
>WENV180540272
OCHQ01012507
80614
Bacteroidota
>WENV180540186
OCHQ01001441
80614
Bacteroidota
>WENV180540547
OCHQ01059877
44852
Bacteroidota
TAA
Leu
>WENV180540807
OCHQ01210455
411550
Bacteroidota
CTG
Gln
>WENV180540813
OCHQ01211552
338165
Bacteroidota
GGT
Thr
>WENV180540671
OCHQ01107319
23696
Bacteroidota
GCT
Ser
>WENV180540196
OCHQ01002430
16220
Bacteroidota
GGA
Ser
>WENV180540249
OCHQ01009851
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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