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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180550669
OCJB01000198
409574
Bacillota
TGT
Thr
>WENV180550671
OCJB01000309
409574
Bacillota
TGT
Thr
>WENV180550731
OCJB01004847
409574
Bacillota
TGT
Thr
>WENV180550741
OCJB01007025
409574
Bacillota
TGT
Thr
>WENV180550678
OCJB01000468
10560
Bacillota
GGA
Ser
>WENV180550733
OCJB01004847
118788
Bacillota
TAG
Leu
>WENV180550664
OCJB01000160
338208
Bacillota
>WENV180550743
OCJB01007033
16235
Bacillota
>WENV180550747
OCJB01007157
444721
Bacillota
TCC
Gly
>WENV180550700
OCJB01000981
411585
Bacillota
GCA
Cys
>WENV180550673
OCJB01000328
411585
Bacillota
GCA
Cys
>WENV180550587
OCJB01000016
314670
Bacillota
GAA
Phe
>WENV180550693
OCJB01000981
42270
Bacillota
>WENV180550698
OCJB01000981
144767
Bacillota
GTG
His
>WENV180550742
OCJB01007025
110221
Bacillota
GTA
Tyr
>WENV180550732
OCJB01004847
110221
Bacillota
GTA
Tyr
>WENV180550697
OCJB01000981
163753
Bacillota
TGG
Pro
>WENV180550703
OCJB01000981
319167
Bacillota
CAT
Met
>WENV180550674
OCJB01000328
144833
Bacillota
ACG
Arg
>WENV180550679
OCJB01000520
44874
Bacillota
CAA
Leu
>WENV180550729
OCJB01003691
235292
Bacillota
CCA
Trp
>WENV180550663
OCJB01000160
199895
Bacillota
GTC
Asp
>WENV180550690
OCJB01000981
144762
Bacillota
TCT
Arg
>WENV180550665
OCJB01000160
144762
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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