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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180550670
OCJB01000216
235102
Bacteroidota
CGT
Thr
>WENV180550654
OCJB01000096
436206
Bacteroidota
TTG
Gln
>WENV180550601
OCJB01000022
338124
Bacteroidota
CCG
Arg
>WENV180550659
OCJB01000123
338132
Bacteroidota
GCA
Cys
>WENV180550740
OCJB01007013
193809
Bacteroidota
CAT
Met
>WENV180550552
OCJB01000010
301449
Bacteroidota
CGG
Pro
>WENV180550640
OCJB01000076
144656
Bacteroidota
GTG
His
>WENV180550624
OCJB01000047
235207
Bacteroidota
CAT
Met
>WENV180550636
OCJB01000066
143169
Bacteroidota
GGG
Pro
>WENV180550607
OCJB01000030
80607
Bacteroidota
GTA
Tyr
>WENV180550549
OCJB01000010
80607
Bacteroidota
GTA
Tyr
>WENV180550647
OCJB01000081
113604
Bacteroidota
>WENV180550644
OCJB01000081
113604
Bacteroidota
>WENV180550725
OCJB01002972
144590
Bacteroidota
GTT
Asn
>WENV180550661
OCJB01000139
95559
Bacteroidota
TAG
Leu
>WENV180550639
OCJB01000073
144655
Bacteroidota
GGC
Ala
>WENV180550546
OCJB01000009
44852
Bacteroidota
TAA
Leu
>WENV180550745
OCJB01007057
56823
Bacteroidota
TGA
Ser
>WENV180550675
OCJB01000355
16224
Bacteroidota
GGA
Ser
>WENV180550617
OCJB01000045
16220
Bacteroidota
GGA
Ser
>WENV180550544
OCJB01000009
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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