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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180561114
OCKX01012116
119475
Actinomycetota
TAA
Leu
>WENV180561056
OCKX01004257
235092
Actinomycetota
CCG
Arg
>WENV180561100
OCKX01008752
16219
Actinomycetota
GCT
Ser
>WENV180561119
OCKX01012718
235174
Actinomycetota
TGC
Ala
>WENV180561037
OCKX01002940
235101
Actinomycetota
TTT
Lys
>WENV180561133
OCKX01015096
198659
Actinomycetota
TAC
Val
>WENV180561117
OCKX01012713
144593
Actinomycetota
TAT
Ile
>WENV180561201
OCKX01043430
144636
Actinomycetota
GAT
Ile
>WENV180561109
OCKX01010529
338148
Actinomycetota
CTG
Gln
>WENV180561140
OCKX01016167
235148
Actinomycetota
GTT
Asn
>WENV180561228
OCKX01056921
176456
Actinomycetota
TCT
Arg
>WENV180561061
OCKX01004692
411554
Actinomycetota
CCC
Gly
>WENV180561083
OCKX01007233
144595
Actinomycetota
CAA
Leu
>WENV180561027
OCKX01002161
235149
Actinomycetota
CCT
Arg
>WENV180561193
OCKX01034794
235121
Actinomycetota
CGT
Thr
>WENV180561205
OCKX01044755
144635
Actinomycetota
TGG
Pro
>WENV180561120
OCKX01012718
235173
Actinomycetota
GGC
Ala
>WENV180561099
OCKX01008696
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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