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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180576065
OCLY01104030
144589
Actinomycetota
ACG
Arg
>WENV180575893
OCLY01026222
235174
Actinomycetota
TGC
Ala
>WENV180576046
OCLY01094975
235101
Actinomycetota
TTT
Lys
>WENV180576001
OCLY01073740
98279
Actinomycetota
GTA
Tyr
>WENV180575851
OCLY01017189
338148
Actinomycetota
CTG
Gln
>WENV180575895
OCLY01027214
235148
Actinomycetota
GTT
Asn
>WENV180576033
OCLY01087183
176456
Actinomycetota
TCT
Arg
>WENV180576079
OCLY01123748
144825
Actinomycetota
CAT
Met
>WENV180575807
OCLY01011570
411554
Actinomycetota
CCC
Gly
>WENV180575933
OCLY01035461
113601
Actinomycetota
TAG
Leu
>WENV180576009
OCLY01076460
144595
Actinomycetota
CAA
Leu
>WENV180575969
OCLY01053058
144635
Actinomycetota
TGG
Pro
>WENV180576027
OCLY01084146
119485
Actinomycetota
TAA
Leu
>WENV180575881
OCLY01022885
80622
Actinomycetota
CAG
Leu
>WENV180575894
OCLY01026222
235173
Actinomycetota
GGC
Ala
>WENV180575957
OCLY01048679
144660
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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