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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180579225
OCMC01082277
144589
Actinomycetota
ACG
Arg
>WENV180579153
OCMC01049170
37070
Actinomycetota
CGA
Ser
>WENV180578987
OCMC01013626
235092
Actinomycetota
CCG
Arg
>WENV180579125
OCMC01041895
162208
Actinomycetota
TAC
Val
>WENV180579157
OCMC01050899
16219
Actinomycetota
GCT
Ser
>WENV180578840
OCMC01003093
235174
Actinomycetota
TGC
Ala
>WENV180579068
OCMC01027956
235101
Actinomycetota
TTT
Lys
>WENV180579360
OCMC01184255
145345
Actinomycetota
TAC
Val
>WENV180578972
OCMC01011058
16223
Actinomycetota
GAG
Leu
>WENV180579029
OCMC01019755
44942
Actinomycetota
TGA
Ser
>WENV180579315
OCMC01139625
144636
Actinomycetota
GAT
Ile
>WENV180578935
OCMC01007277
338148
Actinomycetota
CTG
Gln
>WENV180579167
OCMC01054459
235148
Actinomycetota
GTT
Asn
>WENV180578959
OCMC01009145
176456
Actinomycetota
TCT
Arg
>WENV180579372
OCMC01191450
338139
Actinomycetota
GTT
Asn
>WENV180578917
OCMC01006322
411554
Actinomycetota
CCC
Gly
>WENV180579182
OCMC01061738
113601
Actinomycetota
TAG
Leu
>WENV180579191
OCMC01067293
144595
Actinomycetota
CAA
Leu
>WENV180579181
OCMC01061738
235121
Actinomycetota
CGT
Thr
>WENV180579142
OCMC01046610
80622
Actinomycetota
CAG
Leu
>WENV180578841
OCMC01003093
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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