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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180593818
OCOY01000040
237201
Alphaproteobacteria
CAT
Met
>WENV180593886
OCOY01002115
237201
Alphaproteobacteria
CAT
Met
>WENV180593963
OCOY01006970
24760
Alphaproteobacteria
TGA
Ser
>WENV180593889
OCOY01002184
80917
Alphaproteobacteria
CAG
Leu
>WENV180594016
OCOY01010804
81064
Alphaproteobacteria
GTA
Tyr
>WENV180593802
OCOY01000015
95611
Alphaproteobacteria
TAG
Leu
>WENV180593803
OCOY01000016
338283
Alphaproteobacteria
CAC
Val
>WENV180593969
OCOY01007333
148353
Alphaproteobacteria
CAT
Met
>WENV180593816
OCOY01000036
338282
Alphaproteobacteria
GTT
Asn
>WENV180593820
OCOY01000051
23560
Alphaproteobacteria
CGA
Ser
>WENV180594092
OCOY01034669
147334
Alphaproteobacteria
CAT
Met
>WENV180593801
OCOY01000013
338289
Alphaproteobacteria
GAC
Val
>WENV180593925
OCOY01003982
236004
Alphaproteobacteria
TTT
Lys
>WENV180593961
OCOY01006755
148158
Alphaproteobacteria
ACG
Arg
>WENV180593968
OCOY01007321
340106
Alphaproteobacteria
GCC
Gly
>WENV180594076
OCOY01027532
239083
Alphaproteobacteria
TGC
Ala
>WENV180594072
OCOY01026900
239083
Alphaproteobacteria
TGC
Ala
>WENV180593855
OCOY01000705
239083
Alphaproteobacteria
TGC
Ala
>WENV180594078
OCOY01027532
242540
Alphaproteobacteria
TGC
Ala
>WENV180593923
OCOY01003960
243806
Alphaproteobacteria
CCA
Trp
>WENV180593832
OCOY01000294
243806
Alphaproteobacteria
CCA
Trp
>WENV180594079
OCOY01028491
152510
Alphaproteobacteria
GGG
Pro
>WENV180593946
OCOY01005192
338760
Alphaproteobacteria
GAA
Phe
>WENV180594105
OCOY01039186
147283
Alphaproteobacteria
GTG
His
>WENV180594013
OCOY01010454
146626
Alphaproteobacteria
GTG
His
>WENV180593814
OCOY01000033
413302
Alphaproteobacteria
CCC
Gly
>WENV180593799
OCOY01000008
338287
Alphaproteobacteria
GGT
Thr
>WENV180594069
OCOY01024993
114040
Alphaproteobacteria
CAA
Leu
>WENV180593910
OCOY01002928
343498
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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