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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180639563
OCRL01000030
235516
Gammaproteobacteria
GTG
His
>WENV180639565
OCRL01000030
235516
Gammaproteobacteria
GTG
His
>WENV180639912
OCRL01000226
195519
Gammaproteobacteria
CAT
Met
>WENV180639759
OCRL01000120
16242
Gammaproteobacteria
GCT
Ser
>WENV180639511
OCRL01000017
309243
Gammaproteobacteria
GTT
Asn
>WENV180639512
OCRL01000017
309243
Gammaproteobacteria
GTT
Asn
>WENV180639525
OCRL01000020
319098
Gammaproteobacteria
TAC
Val
>WENV180639531
OCRL01000020
319098
Gammaproteobacteria
TAC
Val
>WENV180640156
OCRL01000715
319100
Gammaproteobacteria
GGT
Thr
>WENV180639424
OCRL01000003
144863
Gammaproteobacteria
CAT
Met
>WENV180639444
OCRL01000006
145522
Gammaproteobacteria
CCG
Arg
>WENV180639515
OCRL01000017
80625
Gammaproteobacteria
TAA
Leu
>WENV180639514
OCRL01000017
80625
Gammaproteobacteria
TAA
Leu
>WENV180640026
OCRL01000340
408143
Gammaproteobacteria
>WENV180640025
OCRL01000340
408143
Gammaproteobacteria
>WENV180639442
OCRL01000006
95603
Gammaproteobacteria
TAG
Leu
>WENV180639440
OCRL01000006
95603
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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