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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180648405
OCSJ01007038
82054
Verrucomicrobiota
GTA
Tyr
>WENV180648533
OCSJ01038668
246677
Verrucomicrobiota
CTT
Lys
>WENV180648534
OCSJ01038668
246677
Verrucomicrobiota
CTT
Lys
>WENV180648679
OCSJ01073029
128202
Verrucomicrobiota
GTC
Asp
>WENV180648737
OCSJ01097040
246700
Verrucomicrobiota
TTC
Glu
>WENV180648959
OCSJ01213097
246687
Verrucomicrobiota
CGC
Ala
>WENV180648532
OCSJ01038668
344842
Verrucomicrobiota
CGT
Thr
>WENV180648355
OCSJ01000293
287733
Verrucomicrobiota
CCA
Trp
>WENV180648375
OCSJ01001715
345110
Verrucomicrobiota
CCT
Arg
>WENV180648373
OCSJ01001553
7274
Verrucomicrobiota
CGA
Ser
>WENV180648850
OCSJ01138058
246260
Verrucomicrobiota
>WENV180648545
OCSJ01042114
246728
Verrucomicrobiota
GAA
Phe
>WENV180648638
OCSJ01060044
368497
Verrucomicrobiota
GCC
Gly
>WENV180648546
OCSJ01042114
154693
Verrucomicrobiota
TGG
Pro
>WENV180648354
OCSJ01000293
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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