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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180651314
OCSZ01114212
246701
Verrucomicrobiota
TTT
Lys
>WENV180651617
OCSZ01245568
345133
Verrucomicrobiota
GAC
Val
>WENV180651399
OCSZ01141848
128202
Verrucomicrobiota
GTC
Asp
>WENV180651283
OCSZ01103317
246700
Verrucomicrobiota
TTC
Glu
>WENV180651011
OCSZ01054063
405704
Verrucomicrobiota
GCC
Gly
>WENV180651087
OCSZ01063243
405704
Verrucomicrobiota
GCC
Gly
>WENV180650895
OCSZ01038339
82056
Verrucomicrobiota
TAA
Leu
>WENV180650635
OCSZ01000692
287733
Verrucomicrobiota
CCA
Trp
>WENV180651239
OCSZ01091057
345110
Verrucomicrobiota
CCT
Arg
>WENV180650690
OCSZ01004456
7274
Verrucomicrobiota
CGA
Ser
>WENV180651504
OCSZ01178036
246260
Verrucomicrobiota
>WENV180651378
OCSZ01132777
82181
Verrucomicrobiota
AAG
Leu
>WENV180651253
OCSZ01097203
246728
Verrucomicrobiota
GAA
Phe
>WENV180651703
OCSZ01295990
17023
Verrucomicrobiota
GGA
Ser
>WENV180651254
OCSZ01097203
154693
Verrucomicrobiota
TGG
Pro
>WENV180650634
OCSZ01000692
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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