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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180771705
ODIH01007901
235153
Actinomycetota
CCT
Arg
>WENV180771165
ODIH01001997
245301
Actinomycetota
GCC
Gly
>WENV180771167
ODIH01001997
245301
Actinomycetota
GCC
Gly
>WENV180771823
ODIH01011020
153948
Actinomycetota
GGG
Pro
>WENV180771085
ODIH01001553
144636
Actinomycetota
GAT
Ile
>WENV180771087
ODIH01001553
144636
Actinomycetota
GAT
Ile
>WENV180771458
ODIH01003997
338139
Actinomycetota
GTT
Asn
>WENV180772835
ODIH01296544
144907
Actinomycetota
GGG
Pro
>WENV180772030
ODIH01021072
240009
Actinomycetota
GGC
Ala
>WENV180771706
ODIH01007909
414234
Actinomycetota
CTG
Gln
>WENV180771171
ODIH01002009
158513
Actinomycetota
TGG
Pro
>WENV180771166
ODIH01001997
412834
Actinomycetota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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