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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180914723
ODSZ01003932
16260
Actinomycetota
TGA
Ser
>WENV180914806
ODSZ01013572
16260
Actinomycetota
TGA
Ser
>WENV180914868
ODSZ01035553
149271
Actinomycetota
CAT
Met
>WENV180914840
ODSZ01023227
239204
Actinomycetota
CTT
Lys
>WENV180914869
ODSZ01036332
239204
Actinomycetota
CTT
Lys
>WENV180914858
ODSZ01033618
246299
Actinomycetota
CTT
Lys
>WENV180914827
ODSZ01017997
235388
Actinomycetota
GTG
His
>WENV180914730
ODSZ01004673
149270
Actinomycetota
GTC
Asp
>WENV180914813
ODSZ01015225
152190
Actinomycetota
GAT
Ile
>WENV180914896
ODSZ01061469
340958
Actinomycetota
TTG
Gln
>WENV180914722
ODSZ01003679
97120
Actinomycetota
GTA
Tyr
>WENV180914821
ODSZ01016876
235575
Actinomycetota
CTC
Glu
>WENV180914779
ODSZ01009861
95601
Actinomycetota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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