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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181101314
OECM01060208
413566
Actinomycetota
CCC
Gly
>WENV181101170
OECM01008689
240126
Actinomycetota
GTG
His
>WENV181101141
OECM01006842
340959
Actinomycetota
GTT
Asn
>WENV181101144
OECM01007497
418439
Actinomycetota
TCC
Gly
>WENV181101307
OECM01057837
235610
Actinomycetota
TGT
Thr
>WENV181101211
OECM01016293
16591
Actinomycetota
GAG
Leu
>WENV181101217
OECM01018730
149271
Actinomycetota
CAT
Met
>WENV181101316
OECM01063429
23975
Actinomycetota
GCT
Ser
>WENV181101321
OECM01071333
148467
Actinomycetota
CAT
Met
>WENV181101058
OECM01001332
235388
Actinomycetota
GTG
His
>WENV181101216
OECM01018357
246222
Actinomycetota
CCG
Arg
>WENV181101077
OECM01001926
260823
Actinomycetota
TGC
Ala
>WENV181101298
OECM01051068
37359
Actinomycetota
>WENV181101084
OECM01002146
45767
Actinomycetota
GGA
Ser
>WENV181101076
OECM01001926
152190
Actinomycetota
GAT
Ile
>WENV181101215
OECM01017752
280137
Actinomycetota
CTT
Lys
>WENV181101182
OECM01010277
363559
Actinomycetota
CAC
Val
>WENV181101097
OECM01003211
248046
Actinomycetota
CCA
Trp
>WENV181101235
OECM01023879
149269
Actinomycetota
TGG
Pro
>WENV181101309
OECM01058830
340958
Actinomycetota
TTG
Gln
>WENV181101181
OECM01010277
293092
Actinomycetota
CTC
Glu
>WENV181101146
OECM01007551
59716
Actinomycetota
CAG
Leu
>WENV181101094
OECM01002823
37358
Actinomycetota
TGA
Ser
>WENV181101194
OECM01013146
3306
Actinomycetota
TAT
Ile
>WENV181101195
OECM01013146
96368
Actinomycetota
TAA
Leu
>WENV181101176
OECM01009636
154637
Actinomycetota
CAA
Leu
>WENV181101234
OECM01023879
412870
Actinomycetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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