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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181104419
OEDU01006990
144589
Actinomycetota
ACG
Arg
>WENV181104416
OEDU01004884
37070
Actinomycetota
CGA
Ser
>WENV181104397
OEDU01000976
235174
Actinomycetota
TGC
Ala
>WENV181104407
OEDU01003193
235101
Actinomycetota
TTT
Lys
>WENV181104412
OEDU01003893
145423
Actinomycetota
TCT
Arg
>WENV181104384
OEDU01000014
254857
Actinomycetota
CCG
Arg
>WENV181104392
OEDU01000569
44942
Actinomycetota
TGA
Ser
>WENV181104394
OEDU01000895
98279
Actinomycetota
GTA
Tyr
>WENV181104389
OEDU01000440
235148
Actinomycetota
GTT
Asn
>WENV181104393
OEDU01000771
16467
Actinomycetota
GCT
Ser
>WENV181104408
OEDU01003336
411554
Actinomycetota
CCC
Gly
>WENV181104399
OEDU01001233
113601
Actinomycetota
TAG
Leu
>WENV181104417
OEDU01005783
145343
Actinomycetota
GGG
Pro
>WENV181104406
OEDU01002587
235149
Actinomycetota
CCT
Arg
>WENV181104391
OEDU01000548
47164
Actinomycetota
GGA
Ser
>WENV181104386
OEDU01000181
144635
Actinomycetota
TGG
Pro
>WENV181104401
OEDU01001294
119485
Actinomycetota
TAA
Leu
>WENV181104402
OEDU01001494
80622
Actinomycetota
CAG
Leu
>WENV181104398
OEDU01000976
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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