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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181120255
OEFJ01014192
152471
Fusobacteriota
TGG
Pro
>WENV181120234
OEFJ01013205
151858
Fusobacteriota
GAT
Ile
>WENV181120222
OEFJ01010993
151857
Fusobacteriota
TCT
Arg
>WENV181120063
OEFJ01003605
156827
Fusobacteriota
GTC
Asp
>WENV181120064
OEFJ01003605
242889
Fusobacteriota
TGT
Thr
>WENV181120160
OEFJ01008185
242889
Fusobacteriota
TGT
Thr
>WENV181120257
OEFJ01014192
242891
Fusobacteriota
CTT
Lys
>WENV181120235
OEFJ01013205
151855
Fusobacteriota
TGC
Ala
>WENV181120067
OEFJ01003605
151855
Fusobacteriota
TGC
Ala
>WENV181120058
OEFJ01003457
151855
Fusobacteriota
TGC
Ala
>WENV181120223
OEFJ01010993
127801
Fusobacteriota
CAT
Met
>WENV181120165
OEFJ01008671
113999
Fusobacteriota
TGA
Ser
>WENV181120166
OEFJ01008671
24344
Fusobacteriota
GCT
Ser
>WENV181120221
OEFJ01010993
248546
Fusobacteriota
TTT
Lys
>WENV181120373
OEFJ01058990
415120
Fusobacteriota
GCA
Cys
>WENV181120225
OEFJ01010993
113955
Fusobacteriota
>WENV181120218
OEFJ01010993
45759
Fusobacteriota
TAA
Leu
>WENV181120065
OEFJ01003605
113605
Fusobacteriota
TAG
Leu
>WENV181120415
OEFJ01076478
346237
Fusobacteriota
TTC
Glu
>WENV181120224
OEFJ01010993
346237
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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