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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181196431
OEQX01006548
18465
Bacillota
GCT
Ser
>WENV181196396
OEQX01002179
146697
Bacillota
ACG
Arg
>WENV181196382
OEQX01000975
237285
Bacillota
TGT
Thr
>WENV181196401
OEQX01002630
237286
Bacillota
CTT
Lys
>WENV181196366
OEQX01000587
113680
Bacillota
TAG
Leu
>WENV181196379
OEQX01000915
258936
Bacillota
GGT
Thr
>WENV181196364
OEQX01000540
339362
Bacillota
GTT
Asn
>WENV181196367
OEQX01000587
339363
Bacillota
GCC
Gly
>WENV181196370
OEQX01000648
292519
Bacillota
CAT
Met
>WENV181196385
OEQX01001130
23575
Bacillota
GGA
Ser
>WENV181196430
OEQX01006548
16361
Bacillota
TGA
Ser
>WENV181196420
OEQX01005299
376360
Bacillota
GCA
Cys
>WENV181196365
OEQX01000587
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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