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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181201641
OERP01000122
235097
Bacteroidota
TTT
Lys
>WENV181201659
OERP01000228
235102
Bacteroidota
CGT
Thr
>WENV181201602
OERP01000004
243025
Bacteroidota
CAT
Met
>WENV181201680
OERP01000516
436206
Bacteroidota
TTG
Gln
>WENV181201668
OERP01000318
338124
Bacteroidota
CCG
Arg
>WENV181201716
OERP01001270
338132
Bacteroidota
GCA
Cys
>WENV181201794
OERP01008765
193809
Bacteroidota
CAT
Met
>WENV181201744
OERP01002495
235165
Bacteroidota
CCA
Trp
>WENV181201648
OERP01000174
301449
Bacteroidota
CGG
Pro
>WENV181201771
OERP01004702
144656
Bacteroidota
GTG
His
>WENV181201628
OERP01000081
80607
Bacteroidota
GTA
Tyr
>WENV181201622
OERP01000055
154643
Bacteroidota
CAT
Met
>WENV181201606
OERP01000008
144590
Bacteroidota
GTT
Asn
>WENV181201691
OERP01000683
95559
Bacteroidota
TAG
Leu
>WENV181201703
OERP01001025
419272
Bacteroidota
CTG
Gln
>WENV181201768
OERP01004190
144655
Bacteroidota
GGC
Ala
>WENV181201773
OERP01004813
144639
Bacteroidota
GGC
Ala
>WENV181201643
OERP01000150
139743
Bacteroidota
GGG
Pro
>WENV181201666
OERP01000285
44852
Bacteroidota
TAA
Leu
>WENV181201698
OERP01000813
150485
Bacteroidota
GTT
Asn
>WENV181201646
OERP01000158
353927
Bacteroidota
TTC
Glu
>WENV181201615
OERP01000027
414426
Bacteroidota
CTG
Gln
>WENV181201675
OERP01000444
55270
Bacteroidota
TGA
Ser
>WENV181201647
OERP01000171
16224
Bacteroidota
GGA
Ser
>WENV181201612
OERP01000018
151960
Bacteroidota
GGC
Ala
>WENV181201633
OERP01000088
16220
Bacteroidota
GGA
Ser
>WENV181201761
OERP01003481
338125
Bacteroidota
CCT
Arg
>WENV181201624
OERP01000056
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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