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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181203116
OERT01002044
146699
Bacillota
TCG
Arg
>WENV181203108
OERT01001979
30484
Bacillota
GGA
Ser
>WENV181203199
OERT01014365
37089
Bacillota
TAA
Leu
>WENV181203200
OERT01014543
146697
Bacillota
ACG
Arg
>WENV181203151
OERT01005204
237285
Bacillota
TGT
Thr
>WENV181203184
OERT01011729
237286
Bacillota
CTT
Lys
>WENV181203170
OERT01008372
295019
Bacillota
TGC
Ala
>WENV181203113
OERT01002044
113680
Bacillota
TAG
Leu
>WENV181203115
OERT01002044
412107
Bacillota
TCC
Gly
>WENV181203079
OERT01001234
338550
Bacillota
>WENV181203198
OERT01014365
146698
Bacillota
CAT
Met
>WENV181203164
OERT01008048
380750
Bacillota
TGT
Thr
>WENV181203015
OERT01000172
258936
Bacillota
GGT
Thr
>WENV181203111
OERT01002044
339364
Bacillota
TTG
Gln
>WENV181203114
OERT01002044
339363
Bacillota
GCC
Gly
>WENV181203163
OERT01008048
235288
Bacillota
TAC
Val
>WENV181203110
OERT01002044
237287
Bacillota
GTG
His
>WENV181203168
OERT01008048
163753
Bacillota
TGG
Pro
>WENV181203175
OERT01009269
23575
Bacillota
GGA
Ser
>WENV181203109
OERT01002044
145469
Bacillota
TCT
Arg
>WENV181203149
OERT01005114
339361
Bacillota
CCT
Arg
>WENV181203193
OERT01013151
376360
Bacillota
GCA
Cys
>WENV181203112
OERT01002044
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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