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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1030648
SRR035087.308886
235615
Actinomycetota
TGC
Ala
>SRA1031428
SRR035087.427818
235759
Actinomycetota
>SRA1031515
SRR035087.441824
248046
Actinomycetota
CCA
Trp
>SRA1031524
SRR035087.443337
248046
Actinomycetota
CCA
Trp
>SRA1031652
SRR035087.464775
248046
Actinomycetota
CCA
Trp
>SRA1032142
SRR035087.561949
158373
Actinomycetota
GGG
Pro
>SRA1029953
SRR035087.208130
245899
Actinomycetota
ACG
Arg
>SRA1029273
SRR035087.101475
338763
Actinomycetota
GCC
Gly
>SRA1030652
SRR035087.310149
338763
Actinomycetota
GCC
Gly
>SRA1030867
SRR035087.341714
338763
Actinomycetota
GCC
Gly
>SRA1032196
SRR035087.574211
411983
Actinomycetota
TCC
Gly
>SRA1030255
SRR035087.250494
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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