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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1036791
SRR035090.5888
190649
Bacteroidota
GTT
Asn
>SRA1036854
SRR035090.25644
190649
Bacteroidota
GTT
Asn
>SRA1038320
SRR035090.287509
190649
Bacteroidota
GTT
Asn
>SRA1038522
SRR035090.319865
190649
Bacteroidota
GTT
Asn
>SRA1039459
SRR035090.496215
190649
Bacteroidota
GTT
Asn
>SRA1039800
SRR035090.572785
190649
Bacteroidota
GTT
Asn
>SRA1037075
SRR035090.70363
169357
Bacteroidota
CAT
Met
>SRA1037599
SRR035090.160598
169357
Bacteroidota
CAT
Met
>SRA1038194
SRR035090.262209
169357
Bacteroidota
CAT
Met
>SRA1038807
SRR035090.370889
169357
Bacteroidota
CAT
Met
>SRA1038511
SRR035090.318613
413546
Bacteroidota
GCA
Cys
>SRA1038421
SRR035090.301207
236699
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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