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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1053374
SRR035098.394089
447369
Alphaproteobacteria
GAC
Val
>SRA1053781
SRR035098.494686
447369
Alphaproteobacteria
GAC
Val
>SRA1052732
SRR035098.263276
470881
Alphaproteobacteria
GGT
Thr
>SRA1053886
SRR035098.525687
195706
Alphaproteobacteria
TCT
Arg
>SRA1051652
SRR035098.49493
203616
Alphaproteobacteria
CAT
Met
>SRA1052411
SRR035098.197669
203616
Alphaproteobacteria
CAT
Met
>SRA1053381
SRR035098.395499
203616
Alphaproteobacteria
CAT
Met
>SRA1053495
SRR035098.418102
203616
Alphaproteobacteria
CAT
Met
>SRA1052739
SRR035098.264886
196863
Alphaproteobacteria
TGG
Pro
>SRA1053409
SRR035098.400457
196863
Alphaproteobacteria
TGG
Pro
>SRA1053592
SRR035098.446745
196863
Alphaproteobacteria
TGG
Pro
>SRA1052946
SRR035098.305664
195477
Alphaproteobacteria
GTG
His
>SRA1051699
SRR035098.61196
527023
Alphaproteobacteria
TCC
Gly
>SRA1053099
SRR035098.337125
527023
Alphaproteobacteria
TCC
Gly
>SRA1053117
SRR035098.341569
33196
Alphaproteobacteria
GGA
Ser
>SRA1052972
SRR035098.310125
33286
Alphaproteobacteria
CGA
Ser
>SRA1053789
SRR035098.495913
252748
Alphaproteobacteria
GTG
His
>SRA1052346
SRR035098.184878
84570
Alphaproteobacteria
CAG
Leu
>SRA1051942
SRR035098.110417
464945
Alphaproteobacteria
GTT
Asn
>SRA1052444
SRR035098.205094
464945
Alphaproteobacteria
GTT
Asn
>SRA1052717
SRR035098.260179
464945
Alphaproteobacteria
GTT
Asn
>SRA1052770
SRR035098.272123
464945
Alphaproteobacteria
GTT
Asn
>SRA1052110
SRR035098.143159
329782
Alphaproteobacteria
TTT
Lys
>SRA1053861
SRR035098.519473
329782
Alphaproteobacteria
TTT
Lys
>SRA1053884
SRR035098.525308
329782
Alphaproteobacteria
TTT
Lys
>SRA1052671
SRR035098.250396
530047
Alphaproteobacteria
TCC
Gly
>SRA1051814
SRR035098.81212
198768
Alphaproteobacteria
>SRA1051891
SRR035098.94958
198768
Alphaproteobacteria
>SRA1053470
SRR035098.412978
198768
Alphaproteobacteria
>SRA1051478
SRR035098.12273
479002
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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