tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.180432 (67 seq.)
>W1710808916 LKDZ01000013 Betaproteobacteria Variovorax boronicumulans [LKDZ] 186379 186463 + Leu CAA [ENA] ¡û
>W1710860145 LMCQ01000020 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 190839 190755 - Leu CAA [ENA] ¡û
>W1710862463 LMEK01000001 Betaproteobacteria Variovorax sp. Root434 [LMEK] 234017 233933 - Leu CAA [ENA] ¡û
>W1710873404 LMMT01000009 Betaproteobacteria Pseudorhodoferax sp. Leaf265 [LMMT] 140653 140737 + Leu CAA [ENA] ¡û
>W1710873509 LMMV01000012 Betaproteobacteria Pseudorhodoferax sp. Leaf267 [LMMV] 44800 44716 - Leu CAA [ENA] ¡û
>W1710873761 LMNA01000029 Betaproteobacteria Pseudorhodoferax sp. Leaf274 [LMNA] 41690 41606 - Leu CAA [ENA] ¡û
>W1711123829 LUJJ01000020 Betaproteobacteria Variovorax boronicumulans [LUJJ] 44340 44256 - Leu CAA [ENA] ¡û
>W1711143340 LVHG01000002 Betaproteobacteria Variovorax paradoxus [LVHG] 77987 77903 - Leu CAA [ENA] ¡û
>W1711386492 MEFM01000014 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 86554 86638 + Leu CAA [ENA] ¡û
>W1711387470 MEGR01000008 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 86554 86638 + Leu CAA [ENA] ¡û
>W1711506637 MKWO01000046 Betaproteobacteria Variovorax sp. 67-131 [MKWO] 86546 86630 + Leu CAA [ENA] ¡û
>C171091659 CP019236 Betaproteobacteria Rhodoferax koreense DCY-110 [CP019236] 1607051 1606967 - Leu CAA - ¡û
>W131174643 ARIP01000069 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 26073 25989 - Leu CAA [ENA] ¡û
>W141170128 AXXD01000003 Betaproteobacteria Variovorax sp. JGI 0001020-D06 [AXXD] 13652 13736 + Leu CAA [ENA] ¡û
>W141170159 AXXG01000044 Betaproteobacteria Variovorax sp. JGI 0001016-M12 [AXXG] 982 1066 + Leu CAA [ENA] ¡û
>WENV183731213 PJTS01019937 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 387 303 - Leu CAA [ENA] ¢þ
>WENV183735271 PJUA01006843 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 552 636 + Leu CAA [ENA] ¢þ
>WENV183735588 PJUB01000103 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 17775 17859 + Leu CAA [ENA] ¢þ
>WENV183741434 PJUG01000011 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 354161 354245 + Leu CAA [ENA] ¢þ
>WENV183741991 PJUH01000031 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 120402 120486 + Leu CAA [ENA] ¢þ
>WENV170559285 CXWL01117730 [CXWL] groundwater metagenome; biofilm material 5886 5970 + Leu CAA [ENA] ¢þ
>WENV171003298 NNBT01003696 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 3080 3164 + Leu CAA [ENA] ¢þ
>WENV171003634 NNBU01001176 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 6645 6729 + Leu CAA [ENA] ¢þ
>WENV171003701 NNBV01000411 [NNBV] plant metagenome; symbiotic tissue sample KVS11 79634 79550 - Leu CAA [ENA] ¢þ
>C181078474 CP023284 Betaproteobacteria Variovorax boronicumulans J1 [CP023284] 5723414 5723498 + Leu CAA - ¡û
>C181159377 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 2605167 2605251 + Leu CAA - ¡û
>W09119936 ACEE01000027 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 5895 5811 - Leu CAA [ENA] ¡û
>C141002580 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 1489990 1489906 - Leu CAA [Ensembl] ¡û
>C09111129 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 1411866 1411782 - Leu CAA [Ensembl] ¡û
>W1910792829 MRCN01000009 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 5909 5993 + Leu CAA [ENA] ¡û
>W1911496700 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 5768253 5768337 + Leu CAA [ENA] ¡û
>W1911647326 QAJK01000018 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 67010 67094 + Leu CAA [ENA] ¡û
>W1810072237 PEFF01000001 Betaproteobacteria Variovorax sp. 54 [PEFF] 4642162 4642078 - Leu CAA [ENA] ¡û
>W1810072640 PEFL01000001 Betaproteobacteria Comamonas sp. 26 [PEFL] 937229 937145 - Leu CAA [ENA] ¡û
>W1810192738 PKMT01000007 Betaproteobacteria Variovorax sp. RO1 [PKMT] 98422 98338 - Leu CAA [ENA] ¡û
>W1810486675 QAYA01000008 Betaproteobacteria Variovorax sp. GV040 [QAYA] 316602 316686 + Leu CAA [ENA] ¡û
>W1810577508 QEOH01000002 Betaproteobacteria Variovorax sp. GV014 [QEOH] 591058 591142 + Leu CAA [ENA] ¡û
>W1810672524 QJTM01000002 Betaproteobacteria Variovorax sp. GV035 [QJTM] 316602 316686 + Leu CAA [ENA] ¡û
>W1810676112 QKLT01000008 Betaproteobacteria Variovorax sp. GV042 [QKLT] 316602 316686 + Leu CAA [ENA] ¡û
>W1810682461 QKUE01000002 Betaproteobacteria Variovorax sp. GV004 [QKUE] 316602 316686 + Leu CAA [ENA] ¡û
>W1810759410 QPJK01000001 Betaproteobacteria Pseudorhodoferax soli DSM 21634 [QPJK] 166431 166515 + Leu CAA [ENA] ¡û
>SRA1016088 SRR023846.342990 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 39 123 + Leu CAA [SRA]
>C11123618 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 1555113 1555029 - Leu CAA [Ensembl] ¡û
>W1511508921 JXQQ01000018 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 8949 8865 - Leu CAA [ENA] ¡û
>W1511554991 JZWI01000009 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 117501 117417 - Leu CAA [ENA] ¡û
>C161073183 CP014517 Betaproteobacteria Variovorax sp. PAMC 28711 [CP014517] 3022464 3022380 - Leu CAA [Ensembl] ¡û
>W121084953 AKIW01000020 Betaproteobacteria Variovorax sp. CF313 [AKIW] 38872 38788 - Leu CAA [ENA] ¡û
>W1610072172 BCUS01000094 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 23314 23398 + Leu CAA [ENA] ¡û
>W1610072185 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 1343035 1343119 + Leu CAA [ENA] ¡û
>W1610722491 LMCQ01000020 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 190839 190755 - Leu CAA [ENA] ¡û
>W1610724809 LMEK01000001 Betaproteobacteria Variovorax sp. Root434 [LMEK] 234017 233933 - Leu CAA [ENA] ¡û
>W1610735750 LMMT01000009 Betaproteobacteria Pseudorhodoferax sp. Leaf265 [LMMT] 140653 140737 + Leu CAA [ENA] ¡û
>W1610735855 LMMV01000012 Betaproteobacteria Pseudorhodoferax sp. Leaf267 [LMMV] 44800 44716 - Leu CAA [ENA] ¡û
>W1610736107 LMNA01000029 Betaproteobacteria Pseudorhodoferax sp. Leaf274 [LMNA] 41690 41606 - Leu CAA [ENA] ¡û
>W1610954348 LVHG01000002 Betaproteobacteria Variovorax paradoxus [LVHG] 77987 77903 - Leu CAA [ENA] ¡û
>W1710069374 BCUS01000094 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 23314 23398 + Leu CAA [ENA] ¡û
>W1710069387 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 1343035 1343119 + Leu CAA [ENA] ¡û
>W1710506209 FMUJ01000006 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 145874 145958 + Leu CAA [ENA] ¡û
>W1710512950 FMZU01000015 Betaproteobacteria Variovorax sp. CF079 [FMZU] 11442 11526 + Leu CAA [ENA] ¡û
>W1710517955 FNDR01000006 Betaproteobacteria Variovorax sp. OV700 [FNDR] 399439 399523 + Leu CAA [ENA] ¡û
>W1710530013 FNOL01000001 Betaproteobacteria Variovorax sp. YR634 [FNOL] 412534 412450 - Leu CAA [ENA] ¡û
>W1710531347 FNPM01000001 Betaproteobacteria Variovorax sp. YR266 [FNPM] 422582 422666 + Leu CAA [ENA] ¡û
>W1710542694 FNZJ01000001 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 806783 806699 - Leu CAA [ENA] ¡û
>W1710554292 FOII01000002 Betaproteobacteria Variovorax sp. OV084 [FOII] 433395 433479 + Leu CAA [ENA] ¡û
>W1710558133 FOLP01000001 Betaproteobacteria Variovorax sp. OK212 [FOLP] 806783 806699 - Leu CAA [ENA] ¡û
>W1710572118 FOWL01000002 Betaproteobacteria Variovorax sp. OK605 [FOWL] 176916 176832 - Leu CAA [ENA] ¡û
>W1710573304 FOXJ01000005 Betaproteobacteria Variovorax sp. 770b2 [FOXJ] 364485 364401 - Leu CAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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