tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = CTC

HIT: 21 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.152077 (1 seq.)
>SRA1025727 SRR035085.71705 454 Sequencing (SRP001806) 410 334 - Glu CTC [SRA]
Identical group No.155904 (6 seq.)
>WENV170675861 LDZQ01001147 [LDZQ] terrestrial metagenome; oil reservoir sample I2 49902 49827 - Glu CTC [ENA]
>WENV170676571 LDZS01001635 [LDZS] terrestrial metagenome; oil reservoir sample K3 7095 7020 - Glu CTC [ENA]
>W1910573188 JONQ01000010 Euryarchaeota Methermicoccus shengliensis DSM 18856 (JONQ) 62272 62197 - Glu CTC [ENA]
>SRA1025559 SRR035085.39507 454 Sequencing (SRP001806) 46 120 + Glu CTC [SRA]
>W1610612557 LGEW01000003 Euryarchaeota Euryarchaeota archaeon 55_53 [LGEW] 49902 49827 - Glu CTC [ENA]
>W1610613070 LGFK01000008 Euryarchaeota Methanosarcinales archeaon 56_1174 [LGFK] 7095 7020 - Glu CTC [ENA]
Identical group No.155958 (1 seq.)
>SRA1026753 SRR035085.280202 454 Sequencing (SRP001806) 424 498 + Glu CTC [SRA]
Identical group No.177279 (4 seq.)
>WENV181367886 OFQD01004246 [OFQD] freshwater metagenome; Freshwater Lake 494 569 + Glu CTC [ENA]
>WENV181395429 OFSA01000020 [OFSA] freshwater metagenome; Freshwater Lake 9888 9813 - Glu CTC [ENA]
>C151014516 CP006913 unclassified Bacteria candidate division SR1 bacterium RAAC1_SR1_1 1079790 1079715 - Glu CTC -
>SRA1025447 SRR035085.8591 454 Sequencing (SRP001806) 240 315 + Glu CTC [SRA]
Identical group No.281940 (4 seq.)
>WENV170605048 FUWD010443699 [FUWD] metagenome; unknown 285 360 + Glu CTC [ENA]
>SRA1025492 SRR035085.24301 454 Sequencing (SRP001806) 156 231 + Glu CTC [SRA]
>SRA1025495 SRR035085.24960 454 Sequencing (SRP001806) 286 211 - Glu CTC [SRA]
>SRA1047691 SRR035094.21848 454 Sequencing (SRP001815) 373 298 - Glu CTC [SRA]
Identical group No.281969 (7 seq.)
>WENV170621512 FUWD013061883 [FUWD] metagenome; unknown 3106 3179 + Glu CTC [ENA]
>WENV170626108 FUWD013213866 [FUWD] metagenome; unknown 3 78 + Glu CTC [ENA]
>SRA1017355 SRR035082.125120 454 Sequencing (SRP001803) 146 71 - Glu CTC [SRA]
>SRA1018181 SRR035082.252153 454 Sequencing (SRP001803) 351 278 - Glu CTC [SRA]
>SRA1025618 SRR035085.51299 454 Sequencing (SRP001806) 134 61 - Glu CTC [SRA]
>SRA1040598 SRR035091.121292 454 Sequencing (SRP001812) 110 183 + Glu CTC [SRA]
>SRA1042228 SRR035091.358907 454 Sequencing (SRP001812) 125 52 - Glu CTC [SRA]
Identical group No.282015 (1 seq.)
>SRA1025837 SRR035085.92694 454 Sequencing (SRP001806) 266 191 - Glu CTC [SRA]
Identical group No.282116 (10 seq.)
>WENV170001083 AGBJ01002763 [AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East 342 267 - Glu CTC [ENA]
>WENV170622850 FUWD013123681 [FUWD] metagenome; unknown 433 507 + Glu CTC [ENA]
>WENV170631068 FUWD013337231 [FUWD] metagenome; unknown 433 507 + Glu CTC [ENA]
>SRA1026527 SRR035085.221750 454 Sequencing (SRP001806) 351 276 - Glu CTC [SRA]
>SRA1032556 SRR035088.45416 454 Sequencing (SRP001809) 252 326 + Glu CTC [SRA]
>SRA1032767 SRR035088.98513 454 Sequencing (SRP001809) 91 17 - Glu CTC [SRA]
>SRA1033719 SRR035088.334966 454 Sequencing (SRP001809) 91 17 - Glu CTC [SRA]
>SRA1034857 SRR035089.186121 454 Sequencing (SRP001810) 177 252 + Glu CTC [SRA]
>SRA1035848 SRR035089.387847 454 Sequencing (SRP001810) 132 206 + Glu CTC [SRA]
>SRA1039567 SRR035090.517817 454 Sequencing (SRP001811) 356 430 + Glu CTC [SRA]
Identical group No.399599 (31 seq.)
>W131157526 AQSK01000075 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-E13 [AQSK] 2441 2367 - Glu CTC [ENA]
>W131157623 AQSM01000135 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N14 [AQSM] 4929 5003 + Glu CTC [ENA]
>W131192117 ASKN01000009 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-F02 [ASKN] 21810 21736 - Glu CTC [ENA]
>W131192128 ASKO01000001 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-M08 [ASKO] 23558 23632 + Glu CTC [ENA]
>W131192152 ASKP01000007 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-L05 [ASKP] 3104 3178 + Glu CTC [ENA]
>W131192184 ASKQ01000091 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-O17 [ASKQ] 3188 3262 + Glu CTC [ENA]
>W131192194 ASKR01000012 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA255-B16 [ASKR] 1310 1384 + Glu CTC [ENA]
>W131192205 ASKS01000025 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA255-L20 [ASKS] 3170 3244 + Glu CTC [ENA]
>W131192918 ASNG01000008 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-O02 [ASNG] 3156 3230 + Glu CTC [ENA]
>W131192996 ASNI01000062 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N17 [ASNI] 3169 3243 + Glu CTC [ENA]
>W131193017 ASNJ01000072 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N11 [ASNJ] 2464 2390 - Glu CTC [ENA]
>W131193018 ASNK01000001 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-E20 [ASNK] 3695 3769 + Glu CTC [ENA]
>W131193065 ASNM01000055 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-G08 [ASNM] 3349 3423 + Glu CTC [ENA]
>W131193101 ASNN01000096 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-I11 [ASNN] 3097 3171 + Glu CTC [ENA]
>W131193127 ASNO01000083 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-I16 [ASNO] 3194 3268 + Glu CTC [ENA]
>W131193135 ASNQ01000007 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-K16 [ASNQ] 3039 3113 + Glu CTC [ENA]
>W131193194 ASNT01000030 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-P10 [ASNT] 4938 5012 + Glu CTC [ENA]
>W141139702 AWNX01000087 Cloacimonetes Cloacimonetes bacterium JGI OTU-1 [AWNX] 10592 10518 - Glu CTC [ENA]
>WENV170625346 FUWD013196409 [FUWD] metagenome; unknown 951 877 - Glu CTC [ENA]
>WENV170633586 FUWD013399075 [FUWD] metagenome; unknown 951 877 - Glu CTC [ENA]
>SRA1025458 SRR035085.12094 454 Sequencing (SRP001806) 96 170 + Glu CTC [SRA]
>SRA1026072 SRR035085.137507 454 Sequencing (SRP001806) 98 172 + Glu CTC [SRA]
>SRA1026305 SRR035085.182604 454 Sequencing (SRP001806) 182 108 - Glu CTC [SRA]
>SRA1029415 SRR035087.124236 454 Sequencing (SRP001808) 87 161 + Glu CTC [SRA]
>SRA1029438 SRR035087.127046 454 Sequencing (SRP001808) 87 161 + Glu CTC [SRA]
>SRA1029509 SRR035087.139175 454 Sequencing (SRP001808) 87 161 + Glu CTC [SRA]
>SRA1030231 SRR035087.246293 454 Sequencing (SRP001808) 86 160 + Glu CTC [SRA]
>SRA1030667 SRR035087.311397 454 Sequencing (SRP001808) 206 132 - Glu CTC [SRA]
>SRA1034510 SRR035089.111823 454 Sequencing (SRP001810) 409 335 - Glu CTC [SRA]
>SRA1035622 SRR035089.342147 454 Sequencing (SRP001810) 313 387 + Glu CTC [SRA]
>SRA1036200 SRR035089.469024 454 Sequencing (SRP001810) 168 94 - Glu CTC [SRA]
Identical group No.399637 (1 seq.)
>SRA1025752 SRR035085.76541 454 Sequencing (SRP001806) 387 459 + Glu CTC [SRA]
Identical group No.399640 (3 seq.)
>WENV170611842 FUWD012415431 [FUWD] metagenome; unknown 53 127 + Glu CTC [ENA]
>SRA1025761 SRR035085.78823 454 Sequencing (SRP001806) 240 314 + Glu CTC [SRA]
>SRA1025968 SRR035085.119426 454 Sequencing (SRP001806) 242 316 + Glu CTC [SRA]
Identical group No.399643 (2 seq.)
>WENV170605251 FUWD010461788 [FUWD] metagenome; unknown 600 528 - Glu CTC [ENA]
>SRA1025786 SRR035085.83483 454 Sequencing (SRP001806) 146 74 - Glu CTC [SRA]
Identical group No.399645 (15 seq.)
>WENV181412628 OGCK01003108 [OGCK] hot springs metagenome; hot spring sediment 2979 3053 + Glu CTC [ENA]
>WENV183512438 OMKS01000475 [OMKS] sediment metagenome; hot spring sediment 21842 21916 + Glu CTC [ENA]
>WENV183514318 OMKS01015995 [OMKS] sediment metagenome; hot spring sediment 3103 3029 - Glu CTC [ENA]
>WENV170619704 FUWD013019407 [FUWD] metagenome; unknown 5232 5306 + Glu CTC [ENA]
>WENV170627825 FUWD013237795 [FUWD] metagenome; unknown 5232 5306 + Glu CTC [ENA]
>SRA1025802 SRR035085.86401 454 Sequencing (SRP001806) 227 301 + Glu CTC [SRA]
>SRA1025834 SRR035085.91894 454 Sequencing (SRP001806) 223 149 - Glu CTC [SRA]
>SRA1030947 SRR035087.353014 454 Sequencing (SRP001808) 120 46 - Glu CTC [SRA]
>SRA1031109 SRR035087.375194 454 Sequencing (SRP001808) 94 20 - Glu CTC [SRA]
>SRA1048190 SRR035094.125621 454 Sequencing (SRP001815) 89 15 - Glu CTC [SRA]
>SRA1048357 SRR035094.155999 454 Sequencing (SRP001815) 516 442 - Glu CTC [SRA]
>SRA1048631 SRR035094.212526 454 Sequencing (SRP001815) 379 305 - Glu CTC [SRA]
>SRA1049850 SRR035095.147453 454 Sequencing (SRP001816) 400 326 - Glu CTC [SRA]
>SRA1050150 SRR035095.201207 454 Sequencing (SRP001816) 401 327 - Glu CTC [SRA]
>SRA1050206 SRR035095.212049 454 Sequencing (SRP001816) 514 440 - Glu CTC [SRA]
Identical group No.399653 (4 seq.)
>WENV180390391 OBPK01132228 [OBPK] marine metagenome; Sterile flask 96 22 - Glu CTC [ENA]
>WENV170611846 FUWD012417183 [FUWD] metagenome; unknown 7 81 + Glu CTC [ENA]
>WENV170684666 LFRM01051470 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 228 154 - Glu CTC [ENA]
>SRA1025843 SRR035085.93590 454 Sequencing (SRP001806) 92 166 + Glu CTC [SRA]
Identical group No.399671 (10 seq.)
>WENV170598591 FUWD010040546 [FUWD] metagenome; unknown 321 395 + Glu CTC [ENA]
>WENV170598592 FUWD010040550 [FUWD] metagenome; unknown 10 84 + Glu CTC [ENA]
>WENV170616594 FUWD012893040 [FUWD] metagenome; unknown 471 397 - Glu CTC [ENA]
>SRA1025975 SRR035085.119931 454 Sequencing (SRP001806) 48 122 + Glu CTC [SRA]
>SRA1026100 SRR035085.143267 454 Sequencing (SRP001806) 221 147 - Glu CTC [SRA]
>SRA1034596 SRR035089.131205 454 Sequencing (SRP001810) 323 397 + Glu CTC [SRA]
>SRA1035262 SRR035089.269882 454 Sequencing (SRP001810) 481 407 - Glu CTC [SRA]
>SRA1036298 SRR035089.490077 454 Sequencing (SRP001810) 129 55 - Glu CTC [SRA]
>SRA1036515 SRR035089.535963 454 Sequencing (SRP001810) 10 84 + Glu CTC [SRA]
>SRA1047731 SRR035094.31259 454 Sequencing (SRP001815) 285 211 - Glu CTC [SRA]
Identical group No.399700 (12 seq.)
>WENV170626729 FUWD013229137 [FUWD] metagenome; unknown 6667 6741 + Glu CTC [ENA]
>WENV170629676 FUWD013277285 [FUWD] metagenome; unknown 9164 9238 + Glu CTC [ENA]
>SRA1017136 SRR035082.86917 454 Sequencing (SRP001803) 475 401 - Glu CTC [SRA]
>SRA1018606 SRR035082.320645 454 Sequencing (SRP001803) 223 297 + Glu CTC [SRA]
>SRA1026222 SRR035085.165819 454 Sequencing (SRP001806) 226 300 + Glu CTC [SRA]
>SRA1026255 SRR035085.172990 454 Sequencing (SRP001806) 226 300 + Glu CTC [SRA]
>SRA1032115 SRR035087.555403 454 Sequencing (SRP001808) 232 306 + Glu CTC [SRA]
>SRA1032632 SRR035088.67648 454 Sequencing (SRP001809) 40 114 + Glu CTC [SRA]
>SRA1034123 SRR035088.498464 454 Sequencing (SRP001809) 169 243 + Glu CTC [SRA]
>SRA1043553 SRR035092.137396 454 Sequencing (SRP001813) 189 263 + Glu CTC [SRA]
>SRA1047824 SRR035094.48858 454 Sequencing (SRP001815) 356 430 + Glu CTC [SRA]
>SRA1048978 SRR035094.301169 454 Sequencing (SRP001815) 182 108 - Glu CTC [SRA]
Identical group No.399703 (1 seq.)
>SRA1026254 SRR035085.172645 454 Sequencing (SRP001806) 158 85 - Glu CTC [SRA]
Identical group No.399706 (2 seq.)
>WENV170607855 FUWD010861652 [FUWD] metagenome; unknown 130 202 + Glu CTC [ENA]
>SRA1026296 SRR035085.181531 454 Sequencing (SRP001806) 82 154 + Glu CTC [SRA]
Identical group No.399721 (14 seq.)
>W131162451 AQYX01000136 candidate division OP9 candidate division OP9 bacterium SCGC AAA252-M02 [AQYX] 4860 4786 - Glu CTC [ENA]
>W131193757 ASPA01000003 candidate division OP9 candidate division OP9 bacterium SCGC AAA255-G05 [ASPA] 63582 63508 - Glu CTC [ENA]
>W131193788 ASPB01000014 candidate division OP9 candidate division OP9 bacterium SCGC AB-164-D21 [ASPB] 4852 4778 - Glu CTC [ENA]
>W131193799 ASPC01000010 candidate division OP9 candidate division OP9 bacterium SCGC AAA255-N14 [ASPC] 29708 29634 - Glu CTC [ENA]
>W141139552 AWNT01000047 Atribacteria Atribacteria bacterium JGI OTU-1 [AWNT] 404 330 - Glu CTC [ENA]
>WENV170607716 FUWD010850959 [FUWD] metagenome; unknown 162 88 - Glu CTC [ENA]
>WENV170620364 FUWD013030485 [FUWD] metagenome; unknown 566 640 + Glu CTC [ENA]
>WENV170628501 FUWD013248056 [FUWD] metagenome; unknown 566 640 + Glu CTC [ENA]
>W1910702398 MEYH01000059 CandidatusAtribacteria Candidatus Atribacteria bacterium RBG_19FT_COMBO_35_14 (MEYH) 6600 6526 - Glu CTC [ENA]
>SRA1018844 SRR035082.355627 454 Sequencing (SRP001803) 185 111 - Glu CTC [SRA]
>SRA1026385 SRR035085.198437 454 Sequencing (SRP001806) 84 10 - Glu CTC [SRA]
>SRA1029136 SRR035087.79328 454 Sequencing (SRP001808) 74 148 + Glu CTC [SRA]
>SRA1030714 SRR035087.317663 454 Sequencing (SRP001808) 78 4 - Glu CTC [SRA]
>SRA1036142 SRR035089.453815 454 Sequencing (SRP001810) 385 311 - Glu CTC [SRA]
Identical group No.399724 (1 seq.)
>SRA1026395 SRR035085.200604 454 Sequencing (SRP001806) 157 231 + Glu CTC [SRA]
Identical group No.480656 (1 seq.)
>SRA1025464 SRR035085.15508 454 Sequencing (SRP001806) 176 105 - Glu CTC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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