tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001809)

Anticodon = CGA

HIT: 25 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.2985 (1 seq.)
>SRA1033159 SRR035088.186546 454 Sequencing (SRP001809) 298 394 + Ser CGA [SRA]
Identical group No.4391 (10 seq.)
>WENV170624555 FUWD013183389 [FUWD] metagenome; unknown 5623 5528 - Ser CGA [ENA]
>WENV170632844 FUWD013387975 [FUWD] metagenome; unknown 5623 5528 - Ser CGA [ENA]
>WENV170694115 LGVD01012047 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 157 62 - Ser CGA [ENA]
>WENV170695564 LGVE01121882 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 354 449 + Ser CGA [ENA]
>WENV170697924 LGVF01222883 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 304 399 + Ser CGA [ENA]
>SRA1032487 SRR035088.24006 454 Sequencing (SRP001809) 143 48 - Ser CGA [SRA]
>SRA1032978 SRR035088.142468 454 Sequencing (SRP001809) 36 131 + Ser CGA [SRA]
>SRA1033502 SRR035088.274810 454 Sequencing (SRP001809) 235 330 + Ser CGA [SRA]
>SRA1048500 SRR035094.187787 454 Sequencing (SRP001815) 362 267 - Ser CGA [SRA]
>SRA1050415 SRR035095.258119 454 Sequencing (SRP001816) 31 126 + Ser CGA [SRA]
Identical group No.5212 (1 seq.)
>SRA1032511 SRR035088.33253 454 Sequencing (SRP001809) 131 226 + Ser CGA [SRA]
Identical group No.7681 (1 seq.)
>SRA1034090 SRR035088.482139 454 Sequencing (SRP001809) 109 15 - Ser CGA [SRA]
Identical group No.22556 (2 seq.)
>SRA1033355 SRR035088.233740 454 Sequencing (SRP001809) 178 87 - Ser CGA [SRA]
>SRA1054716 SRR035099.194180 454 Sequencing (SRP001820) 14 105 + Ser CGA [SRA]
Identical group No.24687 (2 seq.)
>WENV170612230 FUWD012544625 [FUWD] metagenome; unknown 12 103 + Ser CGA [ENA]
>SRA1034099 SRR035088.486072 454 Sequencing (SRP001809) 12 103 + Ser CGA [SRA]
Identical group No.28071 (1 seq.)
>SRA1032575 SRR035088.51434 454 Sequencing (SRP001809) 286 195 - Ser CGA [SRA]
Identical group No.28074 (1 seq.)
>SRA1033124 SRR035088.179320 454 Sequencing (SRP001809) 261 170 - Ser CGA [SRA]
Identical group No.28076 (1 seq.)
>SRA1033652 SRR035088.313758 454 Sequencing (SRP001809) 271 362 + Ser CGA [SRA]
Identical group No.34527 (4 seq.)
>WENV170607982 FUWD010878036 [FUWD] metagenome; unknown 279 369 + Ser CGA [ENA]
>SRA1032810 SRR035088.107625 454 Sequencing (SRP001809) 280 370 + Ser CGA [SRA]
>SRA1033704 SRR035088.329930 454 Sequencing (SRP001809) 280 370 + Ser CGA [SRA]
>SRA1054596 SRR035099.170194 454 Sequencing (SRP001820) 102 12 - Ser CGA [SRA]
Identical group No.42647 (2 seq.)
>WENV170697474 LGVF01140470 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 648 736 + Ser CGA [ENA]
>SRA1033699 SRR035088.328797 454 Sequencing (SRP001809) 240 152 - Ser CGA [SRA]
Identical group No.42649 (1 seq.)
>SRA1033825 SRR035088.367004 454 Sequencing (SRP001809) 248 336 + Ser CGA [SRA]
Identical group No.42651 (1 seq.)
>SRA1034112 SRR035088.492097 454 Sequencing (SRP001809) 126 214 + Ser CGA [SRA]
Identical group No.45864 (75 seq.)
>C018277 CP000607 Chlorobiota Chlorobium phaeovibrioides [CP000607] 671308 671222 - Ser CGA [Ensembl]
>WENV170613648 FUWD012815672 [FUWD] metagenome; unknown 954 867 - Ser CGA [ENA]
>WENV170614861 FUWD012843185 [FUWD] metagenome; unknown 231 142 - Ser CGA [ENA]
>W09103339 AAJD01000001 Chlorobiota Chlorobium phaeovibrioides DSM 265 [AAJD] 290114 290027 - Ser CGA [ENA]
>SRA1018617 SRR035082.323272 454 Sequencing (SRP001803) 186 99 - Ser CGA [SRA]
>SRA1020168 SRR035083.65597 454 Sequencing (SRP001804) 187 100 - Ser CGA [SRA]
>SRA1020211 SRR035083.74874 454 Sequencing (SRP001804) 2 89 + Ser CGA [SRA]
>SRA1020328 SRR035083.97491 454 Sequencing (SRP001804) 248 161 - Ser CGA [SRA]
>SRA1020355 SRR035083.101244 454 Sequencing (SRP001804) 383 470 + Ser CGA [SRA]
>SRA1020453 SRR035083.117886 454 Sequencing (SRP001804) 248 161 - Ser CGA [SRA]
>SRA1020631 SRR035083.143169 454 Sequencing (SRP001804) 170 257 + Ser CGA [SRA]
>SRA1020850 SRR035083.172977 454 Sequencing (SRP001804) 247 160 - Ser CGA [SRA]
>SRA1020910 SRR035083.183777 454 Sequencing (SRP001804) 175 88 - Ser CGA [SRA]
>SRA1021268 SRR035083.233721 454 Sequencing (SRP001804) 142 55 - Ser CGA [SRA]
>SRA1021296 SRR035083.238462 454 Sequencing (SRP001804) 2 89 + Ser CGA [SRA]
>SRA1021486 SRR035083.264975 454 Sequencing (SRP001804) 76 163 + Ser CGA [SRA]
>SRA1021528 SRR035083.269768 454 Sequencing (SRP001804) 227 140 - Ser CGA [SRA]
>SRA1021573 SRR035083.274911 454 Sequencing (SRP001804) 153 66 - Ser CGA [SRA]
>SRA1021674 SRR035083.291168 454 Sequencing (SRP001804) 2 89 + Ser CGA [SRA]
>SRA1021725 SRR035083.297770 454 Sequencing (SRP001804) 137 224 + Ser CGA [SRA]
>SRA1021782 SRR035083.307980 454 Sequencing (SRP001804) 170 257 + Ser CGA [SRA]
>SRA1021838 SRR035083.315367 454 Sequencing (SRP001804) 182 269 + Ser CGA [SRA]
>SRA1021845 SRR035083.316909 454 Sequencing (SRP001804) 260 173 - Ser CGA [SRA]
>SRA1021895 SRR035083.326032 454 Sequencing (SRP001804) 255 168 - Ser CGA [SRA]
>SRA1021965 SRR035083.332538 454 Sequencing (SRP001804) 136 223 + Ser CGA [SRA]
>SRA1022018 SRR035083.339812 454 Sequencing (SRP001804) 289 376 + Ser CGA [SRA]
>SRA1022096 SRR035083.353177 454 Sequencing (SRP001804) 188 101 - Ser CGA [SRA]
>SRA1022128 SRR035083.356460 454 Sequencing (SRP001804) 136 223 + Ser CGA [SRA]
>SRA1022192 SRR035083.366402 454 Sequencing (SRP001804) 2 89 + Ser CGA [SRA]
>SRA1022313 SRR035083.387122 454 Sequencing (SRP001804) 231 318 + Ser CGA [SRA]
>SRA1022319 SRR035083.388543 454 Sequencing (SRP001804) 164 77 - Ser CGA [SRA]
>SRA1022409 SRR035083.401887 454 Sequencing (SRP001804) 115 28 - Ser CGA [SRA]
>SRA1022465 SRR035083.409044 454 Sequencing (SRP001804) 177 264 + Ser CGA [SRA]
>SRA1022472 SRR035083.410561 454 Sequencing (SRP001804) 136 223 + Ser CGA [SRA]
>SRA1022633 SRR035083.435416 454 Sequencing (SRP001804) 153 66 - Ser CGA [SRA]
>SRA1022755 SRR035083.454326 454 Sequencing (SRP001804) 170 257 + Ser CGA [SRA]
>SRA1023001 SRR035083.503100 454 Sequencing (SRP001804) 17 104 + Ser CGA [SRA]
>SRA1032010 SRR035087.530095 454 Sequencing (SRP001808) 174 261 + Ser CGA [SRA]
>SRA1032712 SRR035088.85422 454 Sequencing (SRP001809) 71 158 + Ser CGA [SRA]
>SRA1033197 SRR035088.194694 454 Sequencing (SRP001809) 133 46 - Ser CGA [SRA]
>SRA1033810 SRR035088.361644 454 Sequencing (SRP001809) 208 121 - Ser CGA [SRA]
>SRA1034800 SRR035089.175675 454 Sequencing (SRP001810) 227 140 - Ser CGA [SRA]
>SRA1035155 SRR035089.248820 454 Sequencing (SRP001810) 158 71 - Ser CGA [SRA]
>SRA1035653 SRR035089.349665 454 Sequencing (SRP001810) 227 140 - Ser CGA [SRA]
>SRA1035833 SRR035089.384809 454 Sequencing (SRP001810) 247 160 - Ser CGA [SRA]
>SRA1036925 SRR035090.39658 454 Sequencing (SRP001811) 143 56 - Ser CGA [SRA]
>SRA1036980 SRR035090.51463 454 Sequencing (SRP001811) 127 40 - Ser CGA [SRA]
>SRA1037194 SRR035090.91293 454 Sequencing (SRP001811) 270 183 - Ser CGA [SRA]
>SRA1037683 SRR035090.173884 454 Sequencing (SRP001811) 97 10 - Ser CGA [SRA]
>SRA1037756 SRR035090.189246 454 Sequencing (SRP001811) 212 125 - Ser CGA [SRA]
>SRA1038174 SRR035090.258309 454 Sequencing (SRP001811) 279 366 + Ser CGA [SRA]
>SRA1038211 SRR035090.265595 454 Sequencing (SRP001811) 246 159 - Ser CGA [SRA]
>SRA1038215 SRR035090.266359 454 Sequencing (SRP001811) 221 308 + Ser CGA [SRA]
>SRA1038358 SRR035090.291392 454 Sequencing (SRP001811) 246 159 - Ser CGA [SRA]
>SRA1038429 SRR035090.302940 454 Sequencing (SRP001811) 197 110 - Ser CGA [SRA]
>SRA1038468 SRR035090.311214 454 Sequencing (SRP001811) 171 84 - Ser CGA [SRA]
>SRA1038622 SRR035090.338693 454 Sequencing (SRP001811) 183 96 - Ser CGA [SRA]
>SRA1038750 SRR035090.359715 454 Sequencing (SRP001811) 269 182 - Ser CGA [SRA]
>SRA1039088 SRR035090.422553 454 Sequencing (SRP001811) 144 231 + Ser CGA [SRA]
>SRA1039140 SRR035090.431249 454 Sequencing (SRP001811) 118 205 + Ser CGA [SRA]
>SRA1039219 SRR035090.446466 454 Sequencing (SRP001811) 132 45 - Ser CGA [SRA]
>SRA1039271 SRR035090.455240 454 Sequencing (SRP001811) 279 192 - Ser CGA [SRA]
>SRA1039288 SRR035090.459082 454 Sequencing (SRP001811) 190 103 - Ser CGA [SRA]
>SRA1039571 SRR035090.518294 454 Sequencing (SRP001811) 249 162 - Ser CGA [SRA]
>SRA1039704 SRR035090.549321 454 Sequencing (SRP001811) 169 256 + Ser CGA [SRA]
>SRA1042854 SRR035091.456188 454 Sequencing (SRP001812) 201 114 - Ser CGA [SRA]
>SRA1046763 SRR035093.378306 454 Sequencing (SRP001814) 71 158 + Ser CGA [SRA]
>SRA1051704 SRR035098.61345 454 Sequencing (SRP001819) 280 193 - Ser CGA [SRA]
>SRA1052244 SRR035098.166566 454 Sequencing (SRP001819) 87 174 + Ser CGA [SRA]
>SRA1053096 SRR035098.335301 454 Sequencing (SRP001819) 87 174 + Ser CGA [SRA]
>SRA1054041 SRR035099.40553 454 Sequencing (SRP001820) 87 174 + Ser CGA [SRA]
>SRA1054055 SRR035099.44197 454 Sequencing (SRP001820) 242 155 - Ser CGA [SRA]
>SRA1054585 SRR035099.168074 454 Sequencing (SRP001820) 28 115 + Ser CGA [SRA]
>SRA1054679 SRR035099.186690 454 Sequencing (SRP001820) 417 504 + Ser CGA [SRA]
>SRA1054826 SRR035099.224055 454 Sequencing (SRP001820) 310 397 + Ser CGA [SRA]
Identical group No.57978 (3 seq.)
>WENV170612188 FUWD012527533 [FUWD] metagenome; unknown 17 106 + Ser CGA [ENA]
>SRA1033267 SRR035088.210276 454 Sequencing (SRP001809) 17 106 + Ser CGA [SRA]
>SRA1040359 SRR035091.84865 454 Sequencing (SRP001812) 152 64 - Ser CGA [SRA]
Identical group No.66779 (1 seq.)
>SRA1032686 SRR035088.79795 454 Sequencing (SRP001809) 267 178 - Ser CGA [SRA]
Identical group No.66781 (1 seq.)
>SRA1032913 SRR035088.128573 454 Sequencing (SRP001809) 192 281 + Ser CGA [SRA]
Identical group No.66788 (1 seq.)
>SRA1033991 SRR035088.435585 454 Sequencing (SRP001809) 279 368 + Ser CGA [SRA]
Identical group No.66789 (1 seq.)
>SRA1034013 SRR035088.447366 454 Sequencing (SRP001809) 114 25 - Ser CGA [SRA]
Identical group No.87068 (10 seq.)
>WENV170627300 FUWD013232509 [FUWD] metagenome; unknown 5509 5422 - Ser CGA [ENA]
>SRA1030661 SRR035087.310930 454 Sequencing (SRP001808) 111 24 - Ser CGA [SRA]
>SRA1034025 SRR035088.451778 454 Sequencing (SRP001809) 310 223 - Ser CGA [SRA]
>SRA1035115 SRR035089.240303 454 Sequencing (SRP001810) 127 40 - Ser CGA [SRA]
>SRA1040451 SRR035091.99602 454 Sequencing (SRP001812) 94 7 - Ser CGA [SRA]
>SRA1041823 SRR035091.299683 454 Sequencing (SRP001812) 157 70 - Ser CGA [SRA]
>SRA1042749 SRR035091.440409 454 Sequencing (SRP001812) 456 369 - Ser CGA [SRA]
>SRA1043587 SRR035092.142745 454 Sequencing (SRP001813) 152 239 + Ser CGA [SRA]
>SRA1043715 SRR035092.164413 454 Sequencing (SRP001813) 467 380 - Ser CGA [SRA]
>SRA1049710 SRR035095.123259 454 Sequencing (SRP001816) 526 439 - Ser CGA [SRA]
Identical group No.106986 (1 seq.)
>SRA1032633 SRR035088.67756 454 Sequencing (SRP001809) 152 65 - Ser CGA [SRA]
Identical group No.157496 (6 seq.)
>WENV170613369 FUWD012800133 [FUWD] metagenome; unknown 148 233 + Ser CGA [ENA]
>WENV170626505 FUWD013223964 [FUWD] metagenome; unknown 267 184 - Ser CGA [ENA]
>SRA1017918 SRR035082.213887 454 Sequencing (SRP001803) 335 418 + Ser CGA [SRA]
>SRA1030278 SRR035087.254876 454 Sequencing (SRP001808) 267 184 - Ser CGA [SRA]
>SRA1033141 SRR035088.181650 454 Sequencing (SRP001809) 69 152 + Ser CGA [SRA]
>SRA1049824 SRR035095.143692 454 Sequencing (SRP001816) 198 115 - Ser CGA [SRA]
Identical group No.174269 (1 seq.)
>SRA1033147 SRR035088.183200 454 Sequencing (SRP001809) 291 373 + Ser CGA [SRA]
Identical group No.222837 (6 seq.)
>WENV170608170 FUWD010898580 [FUWD] metagenome; unknown 100 184 + Ser CGA [ENA]
>SRA1032984 SRR035088.144017 454 Sequencing (SRP001809) 234 150 - Ser CGA [SRA]
>SRA1041302 SRR035091.225498 454 Sequencing (SRP001812) 53 137 + Ser CGA [SRA]
>SRA1043574 SRR035092.140937 454 Sequencing (SRP001813) 122 206 + Ser CGA [SRA]
>SRA1049194 SRR035095.35758 454 Sequencing (SRP001816) 98 182 + Ser CGA [SRA]
>SRA1049697 SRR035095.121279 454 Sequencing (SRP001816) 76 160 + Ser CGA [SRA]
Identical group No.226331 (1 seq.)
>SRA1033632 SRR035088.308467 454 Sequencing (SRP001809) 239 159 - Ser CGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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