tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001816)

Anticodon = CGA

HIT: 36 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.4391 (10 seq.)
>WENV170624555 FUWD013183389 [FUWD] metagenome; unknown 5623 5528 - Ser CGA [ENA] ¢þ
>WENV170632844 FUWD013387975 [FUWD] metagenome; unknown 5623 5528 - Ser CGA [ENA] ¢þ
>WENV170694115 LGVD01012047 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 157 62 - Ser CGA [ENA] ¢þ
>WENV170695564 LGVE01121882 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 354 449 + Ser CGA [ENA] ¢þ
>WENV170697924 LGVF01222883 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 304 399 + Ser CGA [ENA] ¢þ
>SRA1032487 SRR035088.24006 454 Sequencing (SRP001809) 143 48 - Ser CGA [SRA]
>SRA1032978 SRR035088.142468 454 Sequencing (SRP001809) 36 131 + Ser CGA [SRA]
>SRA1033502 SRR035088.274810 454 Sequencing (SRP001809) 235 330 + Ser CGA [SRA]
>SRA1048500 SRR035094.187787 454 Sequencing (SRP001815) 362 267 - Ser CGA [SRA]
>SRA1050415 SRR035095.258119 454 Sequencing (SRP001816) 31 126 + Ser CGA [SRA]
Identical group No.7006 (1 seq.)
>SRA1049988 SRR035095.172233 454 Sequencing (SRP001816) 112 206 + Ser CGA [SRA]
Identical group No.8251 (18 seq.)
>WENV170599776 FUWD010091905 [FUWD] metagenome; unknown 98 5 - Ser CGA [ENA] ¢þ
>WENV170616560 FUWD012891147 [FUWD] metagenome; unknown 3496 3403 - Ser CGA [ENA] ¢þ
>SRA1026001 SRR035085.124619 454 Sequencing (SRP001806) 279 372 + Ser CGA [SRA]
>SRA1026239 SRR035085.169498 454 Sequencing (SRP001806) 132 39 - Ser CGA [SRA]
>SRA1026398 SRR035085.201684 454 Sequencing (SRP001806) 405 312 - Ser CGA [SRA]
>SRA1026449 SRR035085.208930 454 Sequencing (SRP001806) 269 362 + Ser CGA [SRA]
>SRA1026755 SRR035085.280550 454 Sequencing (SRP001806) 44 137 + Ser CGA [SRA]
>SRA1029042 SRR035087.64489 454 Sequencing (SRP001808) 411 318 - Ser CGA [SRA]
>SRA1029458 SRR035087.130270 454 Sequencing (SRP001808) 177 84 - Ser CGA [SRA]
>SRA1030801 SRR035087.333235 454 Sequencing (SRP001808) 100 193 + Ser CGA [SRA]
>SRA1030953 SRR035087.354145 454 Sequencing (SRP001808) 412 319 - Ser CGA [SRA]
>SRA1032293 SRR035087.596928 454 Sequencing (SRP001808) 397 304 - Ser CGA [SRA]
>SRA1035834 SRR035089.384851 454 Sequencing (SRP001810) 232 139 - Ser CGA [SRA]
>SRA1036006 SRR035089.425438 454 Sequencing (SRP001810) 164 71 - Ser CGA [SRA]
>SRA1049066 SRR035095.13633 454 Sequencing (SRP001816) 168 75 - Ser CGA [SRA]
>SRA1049187 SRR035095.34347 454 Sequencing (SRP001816) 340 433 + Ser CGA [SRA]
>SRA1049747 SRR035095.132861 454 Sequencing (SRP001816) 340 433 + Ser CGA [SRA]
>SRA1050288 SRR035095.232058 454 Sequencing (SRP001816) 188 95 - Ser CGA [SRA]
Identical group No.9995 (3 seq.)
>WENV170612849 FUWD012702907 [FUWD] metagenome; unknown 109 16 - Ser CGA [ENA] ¢þ
>SRA1050648 SRR035095.312829 454 Sequencing (SRP001816) 119 26 - Ser CGA [SRA]
>SRA1050697 SRR035095.329861 454 Sequencing (SRP001816) 119 26 - Ser CGA [SRA]
Identical group No.16322 (1 seq.)
>SRA1049585 SRR035095.98838 454 Sequencing (SRP001816) 164 256 + Ser CGA [SRA]
Identical group No.24651 (4 seq.)
>WENV170603278 FUWD010298307 [FUWD] metagenome; unknown 670 579 - Ser CGA [ENA] ¢þ
>SRA1017890 SRR035082.210885 454 Sequencing (SRP001803) 403 312 - Ser CGA [SRA]
>SRA1042574 SRR035091.410760 454 Sequencing (SRP001812) 242 333 + Ser CGA [SRA]
>SRA1049786 SRR035095.138360 454 Sequencing (SRP001816) 22 113 + Ser CGA [SRA]
Identical group No.24688 (2 seq.)
>WENV170612231 FUWD012544915 [FUWD] metagenome; unknown 126 215 + Ser CGA [ENA] ¢þ
>SRA1049182 SRR035095.33818 454 Sequencing (SRP001816) 266 177 - Ser CGA [SRA]
Identical group No.25449 (1 seq.)
>SRA1049467 SRR035095.82369 454 Sequencing (SRP001816) 119 28 - Ser CGA [SRA]
Identical group No.25452 (1 seq.)
>SRA1050135 SRR035095.197961 454 Sequencing (SRP001816) 192 103 - Ser CGA [SRA]
Identical group No.25453 (1 seq.)
>SRA1050176 SRR035095.206434 454 Sequencing (SRP001816) 202 111 - Ser CGA [SRA]
Identical group No.25455 (1 seq.)
>SRA1050681 SRR035095.324939 454 Sequencing (SRP001816) 201 292 + Ser CGA [SRA]
Identical group No.30421 (5 seq.)
>WENV170626610 FUWD013226691 [FUWD] metagenome; unknown 188 98 - Ser CGA [ENA] ¢þ
>WENV170634206 FUWD013412153 [FUWD] metagenome; unknown 5321 5411 + Ser CGA [ENA] ¢þ
>SRA1034738 SRR035089.163527 454 Sequencing (SRP001810) 288 198 - Ser CGA [SRA]
>SRA1044969 SRR035092.381857 454 Sequencing (SRP001813) 88 178 + Ser CGA [SRA]
>SRA1049889 SRR035095.154743 454 Sequencing (SRP001816) 82 172 + Ser CGA [SRA]
Identical group No.37769 (2 seq.)
>WENV170600781 FUWD010142402 [FUWD] metagenome; unknown 24 114 + Ser CGA [ENA] ¢þ
>SRA1050229 SRR035095.217143 454 Sequencing (SRP001816) 219 131 - Ser CGA [SRA]
Identical group No.37807 (5 seq.)
>WENV170621225 FUWD013052937 [FUWD] metagenome; unknown 854 764 - Ser CGA [ENA] ¢þ
>WENV170629811 FUWD013282543 [FUWD] metagenome; unknown 4752 4662 - Ser CGA [ENA] ¢þ
>SRA1017747 SRR035082.189534 454 Sequencing (SRP001803) 50 140 + Ser CGA [SRA]
>SRA1018708 SRR035082.335791 454 Sequencing (SRP001803) 50 140 + Ser CGA [SRA]
>SRA1049982 SRR035095.171652 454 Sequencing (SRP001816) 210 300 + Ser CGA [SRA]
Identical group No.38968 (1 seq.)
>SRA1049514 SRR035095.88562 454 Sequencing (SRP001816) 231 143 - Ser CGA [SRA]
Identical group No.38969 (1 seq.)
>SRA1049773 SRR035095.136965 454 Sequencing (SRP001816) 343 433 + Ser CGA [SRA]
Identical group No.38972 (1 seq.)
>SRA1050088 SRR035095.189739 454 Sequencing (SRP001816) 110 200 + Ser CGA [SRA]
Identical group No.38976 (1 seq.)
>SRA1050702 SRR035095.331329 454 Sequencing (SRP001816) 52 142 + Ser CGA [SRA]
Identical group No.52745 (4 seq.)
>WENV170612832 FUWD012698464 [FUWD] metagenome; unknown 345 256 - Ser CGA [ENA] ¢þ
>SRA1050168 SRR035095.204482 454 Sequencing (SRP001816) 354 265 - Ser CGA [SRA]
>SRA1054004 SRR035099.32013 454 Sequencing (SRP001820) 278 189 - Ser CGA [SRA]
>SRA1054016 SRR035099.35812 454 Sequencing (SRP001820) 439 350 - Ser CGA [SRA]
Identical group No.57990 (2 seq.)
>WENV170612792 FUWD012690079 [FUWD] metagenome; unknown 78 167 + Ser CGA [ENA] ¢þ
>SRA1049406 SRR035095.72269 454 Sequencing (SRP001816) 88 177 + Ser CGA [SRA]
Identical group No.60073 (1 seq.)
>SRA1049422 SRR035095.75066 454 Sequencing (SRP001816) 292 381 + Ser CGA [SRA]
Identical group No.60077 (2 seq.)
>SRA1049853 SRR035095.148090 454 Sequencing (SRP001816) 428 339 - Ser CGA [SRA]
>SRA1050494 SRR035095.275896 454 Sequencing (SRP001816) 427 340 - Ser CGA [SRA]
Identical group No.60080 (1 seq.)
>SRA1050103 SRR035095.192321 454 Sequencing (SRP001816) 296 209 - Ser CGA [SRA]
Identical group No.60081 (1 seq.)
>SRA1050131 SRR035095.196937 454 Sequencing (SRP001816) 186 99 - Ser CGA [SRA]
Identical group No.79257 (4 seq.)
>WENV170612675 FUWD012656162 [FUWD] metagenome; unknown 145 57 - Ser CGA [ENA] ¢þ
>SRA1044834 SRR035092.353517 454 Sequencing (SRP001813) 145 57 - Ser CGA [SRA]
>SRA1049139 SRR035095.26992 454 Sequencing (SRP001816) 241 153 - Ser CGA [SRA]
>SRA1049249 SRR035095.44460 454 Sequencing (SRP001816) 243 155 - Ser CGA [SRA]
Identical group No.80344 (1 seq.)
>SRA1049703 SRR035095.121695 454 Sequencing (SRP001816) 224 136 - Ser CGA [SRA]
Identical group No.80352 (1 seq.)
>SRA1050605 SRR035095.303961 454 Sequencing (SRP001816) 138 226 + Ser CGA [SRA]
Identical group No.87068 (10 seq.)
>WENV170627300 FUWD013232509 [FUWD] metagenome; unknown 5509 5422 - Ser CGA [ENA] ¢þ
>SRA1030661 SRR035087.310930 454 Sequencing (SRP001808) 111 24 - Ser CGA [SRA]
>SRA1034025 SRR035088.451778 454 Sequencing (SRP001809) 310 223 - Ser CGA [SRA]
>SRA1035115 SRR035089.240303 454 Sequencing (SRP001810) 127 40 - Ser CGA [SRA]
>SRA1040451 SRR035091.99602 454 Sequencing (SRP001812) 94 7 - Ser CGA [SRA]
>SRA1041823 SRR035091.299683 454 Sequencing (SRP001812) 157 70 - Ser CGA [SRA]
>SRA1042749 SRR035091.440409 454 Sequencing (SRP001812) 456 369 - Ser CGA [SRA]
>SRA1043587 SRR035092.142745 454 Sequencing (SRP001813) 152 239 + Ser CGA [SRA]
>SRA1043715 SRR035092.164413 454 Sequencing (SRP001813) 467 380 - Ser CGA [SRA]
>SRA1049710 SRR035095.123259 454 Sequencing (SRP001816) 526 439 - Ser CGA [SRA]
Identical group No.98488 (2 seq.)
>WENV170607783 FUWD010855804 [FUWD] metagenome; unknown 599 512 - Ser CGA [ENA] ¢þ
>SRA1049973 SRR035095.170557 454 Sequencing (SRP001816) 98 185 + Ser CGA [SRA]
Identical group No.98618 (4 seq.)
>WENV170623038 FUWD013133888 [FUWD] metagenome; unknown 807 722 - Ser CGA [ENA] ¢þ
>WENV170631272 FUWD013346934 [FUWD] metagenome; unknown 807 722 - Ser CGA [ENA] ¢þ
>SRA1018225 SRR035082.258329 454 Sequencing (SRP001803) 112 27 - Ser CGA [SRA]
>SRA1049431 SRR035095.77098 454 Sequencing (SRP001816) 34 119 + Ser CGA [SRA]
Identical group No.131614 (5 seq.)
>WENV170608221 FUWD010903468 [FUWD] metagenome; unknown 189 103 - Ser CGA [ENA] ¢þ
>SRA1049000 SRR035094.308198 454 Sequencing (SRP001815) 239 153 - Ser CGA [SRA]
>SRA1049865 SRR035095.149823 454 Sequencing (SRP001816) 145 59 - Ser CGA [SRA]
>SRA1050342 SRR035095.241113 454 Sequencing (SRP001816) 329 415 + Ser CGA [SRA]
>SRA1050634 SRR035095.310363 454 Sequencing (SRP001816) 212 298 + Ser CGA [SRA]
Identical group No.134868 (1 seq.)
>SRA1049788 SRR035095.138778 454 Sequencing (SRP001816) 572 486 - Ser CGA [SRA]
Identical group No.153880 (5 seq.)
>WENV170612261 FUWD012556861 [FUWD] metagenome; unknown 163 248 + Ser CGA [ENA] ¢þ
>SRA1034751 SRR035089.166571 454 Sequencing (SRP001810) 163 248 + Ser CGA [SRA]
>SRA1042214 SRR035091.356724 454 Sequencing (SRP001812) 276 191 - Ser CGA [SRA]
>SRA1049267 SRR035095.47760 454 Sequencing (SRP001816) 338 253 - Ser CGA [SRA]
>SRA1049325 SRR035095.57068 454 Sequencing (SRP001816) 337 252 - Ser CGA [SRA]
Identical group No.157496 (6 seq.)
>WENV170613369 FUWD012800133 [FUWD] metagenome; unknown 148 233 + Ser CGA [ENA] ¢þ
>WENV170626505 FUWD013223964 [FUWD] metagenome; unknown 267 184 - Ser CGA [ENA] ¢þ
>SRA1017918 SRR035082.213887 454 Sequencing (SRP001803) 335 418 + Ser CGA [SRA]
>SRA1030278 SRR035087.254876 454 Sequencing (SRP001808) 267 184 - Ser CGA [SRA]
>SRA1033141 SRR035088.181650 454 Sequencing (SRP001809) 69 152 + Ser CGA [SRA]
>SRA1049824 SRR035095.143692 454 Sequencing (SRP001816) 198 115 - Ser CGA [SRA]
Identical group No.167770 (1 seq.)
>SRA1049104 SRR035095.20248 454 Sequencing (SRP001816) 591 506 - Ser CGA [SRA]
Identical group No.222837 (6 seq.)
>WENV170608170 FUWD010898580 [FUWD] metagenome; unknown 100 184 + Ser CGA [ENA] ¢þ
>SRA1032984 SRR035088.144017 454 Sequencing (SRP001809) 234 150 - Ser CGA [SRA]
>SRA1041302 SRR035091.225498 454 Sequencing (SRP001812) 53 137 + Ser CGA [SRA]
>SRA1043574 SRR035092.140937 454 Sequencing (SRP001813) 122 206 + Ser CGA [SRA]
>SRA1049194 SRR035095.35758 454 Sequencing (SRP001816) 98 182 + Ser CGA [SRA]
>SRA1049697 SRR035095.121279 454 Sequencing (SRP001816) 76 160 + Ser CGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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