tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001816)

Anticodon = GCC

HIT: 22 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.357759 (2 seq.)
>WENV170604388 FUWD010392380 [FUWD] metagenome; unknown 58 134 + Gly GCC [ENA] ¢þ
>SRA1050525 SRR035095.282341 454 Sequencing (SRP001816) 356 432 + Gly GCC [SRA]
Identical group No.358943 (5 seq.)
>WENV170626733 FUWD013229155 [FUWD] metagenome; unknown 3304 3230 - Gly GCC [ENA] ¢þ
>WENV170629998 FUWD013289331 [FUWD] metagenome; unknown 8608 8534 - Gly GCC [ENA] ¢þ
>SRA1016867 SRR035082.44910 454 Sequencing (SRP001803) 17 91 + Gly GCC [SRA]
>SRA1044357 SRR035092.265662 454 Sequencing (SRP001813) 262 188 - Gly GCC [SRA]
>SRA1049509 SRR035095.87911 454 Sequencing (SRP001816) 339 413 + Gly GCC [SRA]
Identical group No.453620 (10 seq.)
>WENV170612150 FUWD012513221 [FUWD] metagenome; unknown 290 215 - Gly GCC [ENA] ¢þ
>WENV170625846 FUWD013207233 [FUWD] metagenome; unknown 1903 1828 - Gly GCC [ENA] ¢þ
>WENV170634065 FUWD013408945 [FUWD] metagenome; unknown 1903 1828 - Gly GCC [ENA] ¢þ
>SRA1030853 SRR035087.339540 454 Sequencing (SRP001808) 468 393 - Gly GCC [SRA]
>SRA1032529 SRR035088.39268 454 Sequencing (SRP001809) 451 376 - Gly GCC [SRA]
>SRA1033233 SRR035088.202038 454 Sequencing (SRP001809) 392 317 - Gly GCC [SRA]
>SRA1035005 SRR035089.216786 454 Sequencing (SRP001810) 328 403 + Gly GCC [SRA]
>SRA1049706 SRR035095.122164 454 Sequencing (SRP001816) 68 143 + Gly GCC [SRA]
>W10123423 ADZZ01000070 Unclassified delta proteobacterium NaphS2 [ADZZ] 2782 2707 - Gly GCC [ENA] ¡û
>W11130221 ADZZ01000070 Unclassified delta proteobacterium NaphS2 [ADZZ] 2782 2707 - Gly GCC [ENA] ¡û
Identical group No.484104 (3 seq.)
>WENV170611965 FUWD012470739 [FUWD] metagenome; unknown 207 132 - Gly GCC [ENA] ¢þ
>SRA1029169 SRR035087.86330 454 Sequencing (SRP001808) 370 295 - Gly GCC [SRA]
>SRA1049100 SRR035095.19164 454 Sequencing (SRP001816) 218 143 - Gly GCC [SRA]
Identical group No.563113 (1 seq.)
>SRA1049887 SRR035095.154430 454 Sequencing (SRP001816) 433 358 - Gly GCC [SRA]
Identical group No.654302 (2 seq.)
>SRA1025964 SRR035085.118046 454 Sequencing (SRP001806) 98 24 - Gly GCC [SRA]
>SRA1050542 SRR035095.287665 454 Sequencing (SRP001816) 91 165 + Gly GCC [SRA]
Identical group No.654348 (9 seq.)
>WENV170598876 FUWD010052990 [FUWD] metagenome; unknown 432 506 + Gly GCC [ENA] ¢þ
>WENV170624831 FUWD013187434 [FUWD] metagenome; unknown 346 272 - Gly GCC [ENA] ¢þ
>WENV170633099 FUWD013391325 [FUWD] metagenome; unknown 346 272 - Gly GCC [ENA] ¢þ
>SRA1026336 SRR035085.187784 454 Sequencing (SRP001806) 71 145 + Gly GCC [SRA]
>SRA1026438 SRR035085.207234 454 Sequencing (SRP001806) 103 177 + Gly GCC [SRA]
>SRA1031764 SRR035087.484317 454 Sequencing (SRP001808) 319 393 + Gly GCC [SRA]
>SRA1033475 SRR035088.268573 454 Sequencing (SRP001809) 251 325 + Gly GCC [SRA]
>SRA1033966 SRR035088.425241 454 Sequencing (SRP001809) 124 50 - Gly GCC [SRA]
>SRA1050664 SRR035095.318368 454 Sequencing (SRP001816) 83 157 + Gly GCC [SRA]
Identical group No.654382 (20 seq.)
>W131162458 AQYX01000174 Atribacterota Atribacteria bacterium SCGC AAA252-M02 OP9 bacterium SCGC AAA252-M02 [AQYX] 1576 1650 + Gly GCC [ENA] ¡û
>W131193731 ASOX01000020 Atribacterota Atribacteria bacterium SCGC AB-164-P05 OP9 bacterium SCGC AB-164-P05 [ASOX] 2197 2271 + Gly GCC [ENA] ¡û
>W131193767 ASPA01000029 Atribacterota Atribacteria bacterium SCGC AAA255-G05 OP9 bacterium SCGC AAA255-G05 [ASPA] 8014 8088 + Gly GCC [ENA] ¡û
>W131203645 ASZL01000006 Atribacterota Atribacteria bacterium SCGC AB-164-M20 OP9 bacterium SCGC AB-164-M20 [ASZL] 1576 1650 + Gly GCC [ENA] ¡û
>W141139544 AWNT01000010 Atribacterota Atribacteria bacterium JGI OTU-1 [AWNT] 1576 1650 + Gly GCC [ENA] ¡û
>WENV170600991 FUWD010151795 [FUWD] metagenome; unknown 520 594 + Gly GCC [ENA] ¢þ
>WENV170618896 FUWD012991347 [FUWD] metagenome; unknown 726 652 - Gly GCC [ENA] ¢þ
>WENV170626388 FUWD013221090 [FUWD] metagenome; unknown 1356 1282 - Gly GCC [ENA] ¢þ
>WENV170695462 LGVE01097978 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 146 72 - Gly GCC [ENA] ¢þ
>SRA1018715 SRR035082.336875 454 Sequencing (SRP001803) 103 177 + Gly GCC [SRA]
>SRA1026544 SRR035085.224939 454 Sequencing (SRP001806) 170 244 + Gly GCC [SRA]
>SRA1029498 SRR035087.137046 454 Sequencing (SRP001808) 121 195 + Gly GCC [SRA]
>SRA1029966 SRR035087.209149 454 Sequencing (SRP001808) 275 201 - Gly GCC [SRA]
>SRA1031047 SRR035087.364477 454 Sequencing (SRP001808) 17 91 + Gly GCC [SRA]
>SRA1031164 SRR035087.382926 454 Sequencing (SRP001808) 87 161 + Gly GCC [SRA]
>SRA1032365 SRR035087.612587 454 Sequencing (SRP001808) 312 386 + Gly GCC [SRA]
>SRA1032789 SRR035088.103199 454 Sequencing (SRP001809) 158 232 + Gly GCC [SRA]
>SRA1035990 SRR035089.421457 454 Sequencing (SRP001810) 449 523 + Gly GCC [SRA]
>SRA1049957 SRR035095.168237 454 Sequencing (SRP001816) 474 400 - Gly GCC [SRA]
>W1510076779 CDPL01000047 Atribacterota Atribacteria bacterium JGI 0000014-F07 [CDPL] 5784 5858 + Gly GCC [ENA] ¡û
Identical group No.654398 (11 seq.)
>WENV170601746 FUWD010191354 [FUWD] metagenome; unknown 514 588 + Gly GCC [ENA] ¢þ
>WENV170627294 FUWD013232509 [FUWD] metagenome; unknown 1359 1433 + Gly GCC [ENA] ¢þ
>SRA1017797 SRR035082.197352 454 Sequencing (SRP001803) 88 14 - Gly GCC [SRA]
>SRA1026694 SRR035085.262121 454 Sequencing (SRP001806) 62 136 + Gly GCC [SRA]
>SRA1041884 SRR035091.310269 454 Sequencing (SRP001812) 382 457 + Gly GCC [SRA]
>SRA1042136 SRR035091.344224 454 Sequencing (SRP001812) 20 94 + Gly GCC [SRA]
>SRA1043167 SRR035092.62482 454 Sequencing (SRP001813) 192 266 + Gly GCC [SRA]
>SRA1043832 SRR035092.182353 454 Sequencing (SRP001813) 112 186 + Gly GCC [SRA]
>SRA1044886 SRR035092.366654 454 Sequencing (SRP001813) 288 214 - Gly GCC [SRA]
>SRA1047875 SRR035094.59292 454 Sequencing (SRP001815) 116 42 - Gly GCC [SRA]
>SRA1049449 SRR035095.79463 454 Sequencing (SRP001816) 108 34 - Gly GCC [SRA]
Identical group No.654497 (23 seq.)
>WENV170619662 FUWD013018718 [FUWD] metagenome; unknown 2175 2101 - Gly GCC [ENA] ¢þ
>WENV170624354 FUWD013180297 [FUWD] metagenome; unknown 8347 8421 + Gly GCC [ENA] ¢þ
>WENV170627779 FUWD013237156 [FUWD] metagenome; unknown 2175 2101 - Gly GCC [ENA] ¢þ
>WENV170632640 FUWD013385496 [FUWD] metagenome; unknown 8347 8421 + Gly GCC [ENA] ¢þ
>SRA1029599 SRR035087.150182 454 Sequencing (SRP001808) 200 126 - Gly GCC [SRA]
>SRA1029985 SRR035087.211645 454 Sequencing (SRP001808) 364 438 + Gly GCC [SRA]
>SRA1030802 SRR035087.333239 454 Sequencing (SRP001808) 72 146 + Gly GCC [SRA]
>SRA1031140 SRR035087.379648 454 Sequencing (SRP001808) 181 107 - Gly GCC [SRA]
>SRA1031341 SRR035087.414928 454 Sequencing (SRP001808) 300 226 - Gly GCC [SRA]
>SRA1032421 SRR035087.627641 454 Sequencing (SRP001808) 134 60 - Gly GCC [SRA]
>SRA1032906 SRR035088.127852 454 Sequencing (SRP001809) 123 49 - Gly GCC [SRA]
>SRA1033511 SRR035088.276074 454 Sequencing (SRP001809) 37 111 + Gly GCC [SRA]
>SRA1035022 SRR035089.220959 454 Sequencing (SRP001810) 170 244 + Gly GCC [SRA]
>SRA1036124 SRR035089.449970 454 Sequencing (SRP001810) 321 247 - Gly GCC [SRA]
>SRA1036510 SRR035089.535274 454 Sequencing (SRP001810) 326 402 + Gly GCC [SRA]
>SRA1036701 SRR035089.587740 454 Sequencing (SRP001810) 328 254 - Gly GCC [SRA]
>SRA1047807 SRR035094.45272 454 Sequencing (SRP001815) 155 81 - Gly GCC [SRA]
>SRA1049977 SRR035095.171134 454 Sequencing (SRP001816) 160 86 - Gly GCC [SRA]
>SRA1050007 SRR035095.175467 454 Sequencing (SRP001816) 419 345 - Gly GCC [SRA]
>SRA1050057 SRR035095.185002 454 Sequencing (SRP001816) 203 129 - Gly GCC [SRA]
>SRA1050322 SRR035095.237279 454 Sequencing (SRP001816) 308 382 + Gly GCC [SRA]
>SRA1050560 SRR035095.292435 454 Sequencing (SRP001816) 405 331 - Gly GCC [SRA]
>SRA1050586 SRR035095.296976 454 Sequencing (SRP001816) 220 146 - Gly GCC [SRA]
Identical group No.669726 (3 seq.)
>WENV170645294 JMSV01000021 [JMSV] bioreactor metagenome; Culture-2 Bioreactor Bmz derived from microbial biomass from the upper 2 cm of a marine 2853 2779 - Gly GCC [ENA] ¢þ
>WENV170645308 JMSV01000044 [JMSV] bioreactor metagenome; Culture-2 Bioreactor Bmz derived from microbial biomass from the upper 2 cm of a marine 6875 6801 - Gly GCC [ENA] ¢þ
>SRA1049242 SRR035095.43292 454 Sequencing (SRP001816) 466 392 - Gly GCC [SRA]
Identical group No.672281 (12 seq.)
>WENV170625552 FUWD013200123 [FUWD] metagenome; unknown 451 377 - Gly GCC [ENA] ¢þ
>WENV170633779 FUWD013402441 [FUWD] metagenome; unknown 451 377 - Gly GCC [ENA] ¢þ
>SRA1017731 SRR035082.186704 454 Sequencing (SRP001803) 90 16 - Gly GCC [SRA]
>SRA1029090 SRR035087.70837 454 Sequencing (SRP001808) 188 116 - Gly GCC [SRA]
>SRA1033800 SRR035088.359336 454 Sequencing (SRP001809) 217 291 + Gly GCC [SRA]
>SRA1040182 SRR035091.54114 454 Sequencing (SRP001812) 26 100 + Gly GCC [SRA]
>SRA1040985 SRR035091.177885 454 Sequencing (SRP001812) 413 339 - Gly GCC [SRA]
>SRA1041307 SRR035091.226191 454 Sequencing (SRP001812) 142 216 + Gly GCC [SRA]
>SRA1042471 SRR035091.393168 454 Sequencing (SRP001812) 114 40 - Gly GCC [SRA]
>SRA1043131 SRR035092.55002 454 Sequencing (SRP001813) 46 120 + Gly GCC [SRA]
>SRA1048789 SRR035094.248842 454 Sequencing (SRP001815) 300 226 - Gly GCC [SRA]
>SRA1049978 SRR035095.171186 454 Sequencing (SRP001816) 213 287 + Gly GCC [SRA]
Identical group No.710831 (3 seq.)
>WENV170608236 FUWD010905410 [FUWD] metagenome; unknown 434 506 + Gly GCC [ENA] ¢þ
>SRA1050564 SRR035095.293906 454 Sequencing (SRP001816) 69 141 + Gly GCC [SRA]
>SRA1050570 SRR035095.295244 454 Sequencing (SRP001816) 69 141 + Gly GCC [SRA]
Identical group No.711045 (2 seq.)
>WENV170611735 FUWD012385833 [FUWD] metagenome; unknown 146 73 - Gly GCC [ENA] ¢þ
>SRA1049384 SRR035095.67738 454 Sequencing (SRP001816) 126 53 - Gly GCC [SRA]
Identical group No.720399 (1 seq.)
>SRA1049245 SRR035095.43800 454 Sequencing (SRP001816) 219 147 - Gly GCC [SRA]
Identical group No.720419 (1 seq.)
>SRA1049658 SRR035095.112464 454 Sequencing (SRP001816) 456 382 - Gly GCC [SRA]
Identical group No.720430 (1 seq.)
>SRA1049831 SRR035095.144824 454 Sequencing (SRP001816) 279 205 - Gly GCC [SRA]
Identical group No.720431 (1 seq.)
>SRA1049841 SRR035095.146532 454 Sequencing (SRP001816) 430 356 - Gly GCC [SRA]
Identical group No.720433 (2 seq.)
>SRA1049881 SRR035095.152926 454 Sequencing (SRP001816) 176 248 + Gly GCC [SRA]
>SRA1050202 SRR035095.211425 454 Sequencing (SRP001816) 176 248 + Gly GCC [SRA]
Identical group No.720436 (3 seq.)
>WENV180114096 OAPR01152812 [OAPR] marine metagenome; seawater 7 79 + Gly GCC [ENA] ¢þ
>SRA1028408 SRR035086.320227 454 Sequencing (SRP001807) 392 320 - Gly GCC [SRA]
>SRA1049961 SRR035095.168892 454 Sequencing (SRP001816) 148 76 - Gly GCC [SRA]
Identical group No.805253 (2 seq.)
>WENV170612110 FUWD012504878 [FUWD] metagenome; unknown 179 107 - Gly GCC [ENA] ¢þ
>SRA1049812 SRR035095.141672 454 Sequencing (SRP001816) 189 117 - Gly GCC [SRA]
Identical group No.809594 (1 seq.)
>SRA1049933 SRR035095.162628 454 Sequencing (SRP001816) 423 351 - Gly GCC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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