tRNA genes clustered and arranged according to each identical group

Hot springs metagenome ctg_1106445192081

Anticodon = CAT

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.275256 (97 seq.)
>W1710787504 LJJR01000002 Deinococcota Thermus scotoductus [LJJR] 60537 60461 - Met CAT [ENA] ¡û
>W131155621 AQOS01000028 Deinococcota Thermus thermophilus ATCC 33923 [AQOS] 39113 39037 - Met CAT [ENA] ¡û
>W131160707 AQWU01000035 Deinococcota Thermus igniterrae ATCC 700962 [AQWU] 4200 4276 + Met CAT [ENA] ¡û
>W131167527 ARDI01000014 Deinococcota Thermus oshimai DSM 12092 [ARDI] 6827 6751 - Met CAT [ENA] ¡û
>W131177881 ARLD01000018 Deinococcota Thermus scotoductus DSM 8553 [ARLD] 1173 1097 - Met CAT [ENA] ¡û
>W131218106 ATXJ01000010 Deinococcota Thermus islandicus DSM 21543 [ATXJ] 28744 28820 + Met CAT [ENA] ¡û
>W131231962 AUIW01000009 Deinococcota Thermus antranikianii DSM 12462 [AUIW] 75045 74969 - Met CAT [ENA] ¡û
>C025883 AE017221 Deinococcota Thermus thermophilus HB27 [AE017221] 1371658 1371734 + Met CAT [Ensembl] ¡û
>C025937 AP008226 Deinococcota Thermus thermophilus HB8 [AP008226] 1683425 1683501 + Met CAT [Ensembl] ¡û
>C171047194 CP016312 Deinococcota Thermus brockianus GE-1 [CP016312] 713851 713927 + Met CAT - ¡û
>W141080533 ATNI01000126 Deinococcota Thermus sp. NMX2.A1 [ATNI] 15047 14971 - Met CAT [ENA] ¡û
>WENV181184981 OEKZ01000620 [OEKZ] metagenome; 1998 5472 5546 + fMet CAT [ENA] ¢þ
>WENV181222846 OFDC01000380 [OFDC] hot springs metagenome; Water 7614 7541 - fMet CAT [ENA] ¢þ
>WENV181227380 OFDN01008833 [OFDN] hot springs metagenome; Water 82 158 + fMet CAT [ENA] ¢þ
>WENV181229056 OFEJ01000161 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 17488 17561 + fMet CAT [ENA] ¢þ
>WENV181404442 OGCA01004127 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 1124 1051 - fMet CAT [ENA] ¢þ
>WENV181404599 OGCA01021578 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 520 593 + fMet CAT [ENA] ¢þ
>WENV181404769 OGCB01000182 [OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA 1742 1818 + fMet CAT [ENA] ¢þ
>WENV181405143 OGCB01016380 [OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA 583 510 - fMet CAT [ENA] ¢þ
>WENV181405535 OGCE01000291 [OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA 3377 3453 + fMet CAT [ENA] ¢þ
>WENV181407954 OGCH01000284 [OGCH] hot springs metagenome; hot springs 28622 28546 - fMet CAT [ENA] ¢þ
>WENV181408236 OGCH01001066 [OGCH] hot springs metagenome; hot springs 9276 9349 + fMet CAT [ENA] ¢þ
>WENV181408508 OGCH01004210 [OGCH] hot springs metagenome; hot springs 2635 2562 - fMet CAT [ENA] ¢þ
>WENV170574397 FLYM01034055 [FLYM] hot springs metagenome; Sediment 16896 16969 + Met CAT [ENA] ¢þ
>WENV170700728 LJSS01000435 [LJSS] hot springs metagenome; water from Lobios Hot Spring 5249 5325 + Met CAT [ENA] ¢þ
>WENV170700753 LJSS01000597 [LJSS] hot springs metagenome; water from Lobios Hot Spring 5101 5025 - Met CAT [ENA] ¢þ
>WENV170700879 LJSS01005057 [LJSS] hot springs metagenome; water from Lobios Hot Spring 77 1 - Met CAT [ENA] ¢þ
>C181003562 AP017920 Deinococcota Thermus thermophilus TMY [AP017920] 1186501 1186577 + Met CAT - ¡û
>C191159678 CP038452 Deinococcota Thermus caldilimi YIM 78456 [CP038452] 2220545 2220469 - Met CAT - ¡û
>C191190016 LR027517 Deinococcota Thermus thermophilus [LR027517] 1854729 1854653 - Met CAT - ¡û
>W141730220 JNIE01000005 Aquificota Thermocrinis jamiesonii GBS [JNIE] 70677 70604 - Met CAT [ENA] ¡û
>W141818259 JQLJ01000001 Deinococcota Thermus scotoductus KI2 [JQLJ] 2144978 2144902 - Met CAT [ENA] ¡û
>W141818277 JQLK01000001 Deinococcota Thermus tengchongensis YIM 77401 [JQLK] 148215 148291 + Met CAT [ENA] ¡û
>W141820377 JQMV01000003 Deinococcota Thermus amyloliquefaciens YIM 77409 [JQMV] 376589 376513 - Met CAT [ENA] ¡û
>W141820758 JQNC01000003 Deinococcota Thermus caliditerrae [JQNC] 2022629 2022553 - Met CAT [ENA] ¡û
>C141011693 CP007028 Aquificota Thermocrinis ruber DSM 23557 [CP007028] 1458312 1458239 - Met CAT - ¡û
>W1911493333 OBEN01000001 Aquificota Hydrogenobacter hydrogenophilus DSM 2913 [OBEN] 115114 115188 + Met CAT [ENA] ¡û
>W1911578798 PELL01000188 Deinococcota Thermus scotoductus 39_S39 [PELL] 4347 4423 + Met CAT [ENA] ¡û
>W1911578845 PELM01000210 Deinococcota Thermus scotoductus 38_S38 [PELM] 14184 14108 - Met CAT [ENA] ¡û
>W1911578886 PELN01000089 Deinococcota Thermus scotoductus 37_S37 [PELN] 2037 2113 + Met CAT [ENA] ¡û
>W1911578942 PELO01000222 Deinococcota Thermus scotoductus 35_S35 [PELO] 2909 2985 + Met CAT [ENA] ¡û
>W1911578981 PELP01000177 Deinococcota Thermus scotoductus 34_S34 [PELP] 5301 5377 + Met CAT [ENA] ¡û
>W1911579044 PELQ01000155 Deinococcota Thermus scotoductus 33_S33 [PELQ] 21314 21238 - Met CAT [ENA] ¡û
>W1911579079 PELR01000081 Deinococcota Thermus scotoductus 32_S32 [PELR] 2270 2346 + Met CAT [ENA] ¡û
>W1911579122 PELS01000099 Deinococcota Thermus scotoductus 31_S31 [PELS] 2885 2961 + Met CAT [ENA] ¡û
>W1911579190 PELT01000222 Deinococcota Thermus scotoductus 30_S30 [PELT] 21614 21538 - Met CAT [ENA] ¡û
>W1911579221 PELU01000117 Deinococcota Thermus scotoductus 29_S29 [PELU] 2037 2113 + Met CAT [ENA] ¡û
>W1911579308 PELW01000044 Deinococcota Thermus scotoductus 27_S27 [PELW] 20792 20716 - Met CAT [ENA] ¡û
>W1911579369 PELX01000066 Deinococcota Thermus scotoductus 26_S26 [PELX] 22638 22562 - Met CAT [ENA] ¡û
>W1911579435 PELY01000277 Deinococcota Thermus scotoductus 25_S25 [PELY] 1959 2035 + Met CAT [ENA] ¡û
>W1911579482 PELZ01000442 Deinococcota Thermus scotoductus 24_S24 [PELZ] 5333 5257 - Met CAT [ENA] ¡û
>W1911579504 PEMA01000105 Deinococcota Thermus scotoductus 23_S23 [PEMA] 619 543 - Met CAT [ENA] ¡û
>W1911579543 PEMB01000022 Deinococcota Thermus scotoductus 22_S22 [PEMB] 21295 21219 - Met CAT [ENA] ¡û
>W1911579608 PEMC01000088 Deinococcota Thermus scotoductus 21_S21 [PEMC] 21499 21423 - Met CAT [ENA] ¡û
>W1911579658 PEMD01000122 Deinococcota Thermus scotoductus 20_S20 [PEMD] 1914 1990 + Met CAT [ENA] ¡û
>W1911579703 PEME01000133 Deinococcota Thermus scotoductus 19_S19 [PEME] 2979 3055 + Met CAT [ENA] ¡û
>W1911579759 PEMF01000233 Deinococcota Thermus scotoductus 18_S18 [PEMF] 14262 14186 - Met CAT [ENA] ¡û
>W1911579807 PEMG01000321 Deinococcota Thermus scotoductus 17_S17 [PEMG] 2127 2203 + Met CAT [ENA] ¡û
>W1911579847 PEMH01000155 Deinococcota Thermus scotoductus 16_S16 [PEMH] 14224 14148 - Met CAT [ENA] ¡û
>W1911579883 PEMI01000084 Deinococcota Thermus scotoductus 15_S15 [PEMI] 2270 2346 + Met CAT [ENA] ¡û
>W1911579935 PEMJ01000066 Deinococcota Thermus scotoductus 14_S14 [PEMJ] 27327 27403 + Met CAT [ENA] ¡û
>W1911579936 PEMJ01000066 Deinococcota Thermus scotoductus 14_S14 [PEMJ] 1392 1316 - Met CAT [ENA] ¡û
>W1911579982 PEMK01000077 Deinococcota Thermus scotoductus 13_S13 [PEMK] 2970 3046 + Met CAT [ENA] ¡û
>W1911580028 PEML01000066 Deinococcota Thermus scotoductus 12_S12 [PEML] 22605 22529 - Met CAT [ENA] ¡û
>W1911580111 PEMM01000299 Deinococcota Thermus scotoductus 11_S11 [PEMM] 2347 2423 + Met CAT [ENA] ¡û
>W1911580144 PEMN01000244 Deinococcota Thermus scotoductus 10_S10 [PEMN] 14262 14186 - Met CAT [ENA] ¡û
>W1911580173 PEMO01000082 Deinococcota Thermus scotoductus 9_S9 [PEMO] 2270 2346 + Met CAT [ENA] ¡û
>W1911580220 PEMP01000105 Deinococcota Thermus scotoductus 8_S8 [PEMP] 2037 2113 + Met CAT [ENA] ¡û
>W1911580272 PEMQ01000133 Deinococcota Thermus scotoductus 7_S7 [PEMQ] 2885 2961 + Met CAT [ENA] ¡û
>W1911580333 PEMR01000122 Deinococcota Thermus scotoductus 6_S6 [PEMR] 1998 2074 + Met CAT [ENA] ¡û
>W1911580358 PEMS01000066 Deinococcota Thermus scotoductus 5_S5 [PEMS] 20792 20716 - Met CAT [ENA] ¡û
>W1911580421 PEMT01000077 Deinococcota Thermus scotoductus 4_S4 [PEMT] 2885 2961 + Met CAT [ENA] ¡û
>W1911580473 PEMU01000155 Deinococcota Thermus scotoductus 3_S3 [PEMU] 2926 3002 + Met CAT [ENA] ¡û
>W1911580536 PEMV01000310 Deinococcota Thermus scotoductus 2_S2 [PEMV] 2957 3033 + Met CAT [ENA] ¡û
>W1911580563 PEMW01000144 Deinococcota Thermus scotoductus 1_S1 [PEMW] 1347 1423 + Met CAT [ENA] ¡û
>W1810268447 PRDA01000034 Deinococcota Thermus tenuipuniceus YIM 76954 [PRDA] 26705 26629 - Met CAT [ENA] ¡û
>W1810605107 QGMX01000019 Deinococcota Thermus caldifontis YIM 73026 [QGMX] 18777 18853 + Met CAT [ENA] ¡û
>W1810889169 QURO01000004 Deinococcota Thermus sediminis L198 [QURO] 1592762 1592686 - Met CAT [ENA] ¡û
>ENV09004183 ADKJ01001235 Hot springs metagenome ctg_1106445192081 4974 5050 + Met CAT [ENA] ¡û
>C10107872 AP011112 Aquificota Hydrogenobacter thermophilus TK-6 [AP011112] 1140303 1140229 - Met CAT - ¡û
>C11111345 CP002221 Aquificota Hydrogenobacter thermophilus TK-6 [CP002221] 1140161 1140087 - Met CAT - ¡û
>W1511312805 JPSL02000040 Deinococcota Thermus filiformis ATCC 43280 [JPSL] 131451 131375 - Met CAT [ENA] ¡û
>W1511401678 JTJB01000001 Deinococcota Thermus sp. 2.9 [JTJB] 247069 246993 - Met CAT [ENA] ¡û
>C11123075 CP001962 Deinococcota Thermus scotoductus SA-01 [CP001962] 378497 378421 - Met CAT [Ensembl] ¡û
>C11123190 CP002777 Deinococcota Thermus thermophilus SG0.5JP17-16 [CP002777] 1717426 1717502 + Met CAT [Ensembl] ¡û
>C121006405 CP003126 Deinococcota Thermus sp. CCB_US3_UF1 [CP003126] 1910219 1910295 + Met CAT [Ensembl] ¡û
>C121009739 CP003252 Deinococcota Thermus thermophilus JL-18 [CP003252] 1758818 1758894 + Met CAT [Ensembl] ¡û
>C161028709 CP010822 Deinococcota Thermus aquaticus Y51MC23 [CP010822] 282627 282551 - Met CAT - ¡û
>C161067116 CP014141 Deinococcota Thermus parvatiensis RL [CP014141] 304578 304502 - Met CAT [Ensembl] ¡û
>W121056047 AIJQ01000017 Deinococcota Thermus parvatiensis RL [AIJQ] 81255 81331 + Met CAT [ENA] ¡û
>W1610045305 BBBL01000018 Deinococcota Thermus kawarayensis JCM 12314 [BBBL] 3904 3980 + Met CAT [ENA] ¡û
>W1610045390 BBBN01000003 Deinococcota Thermus sp. JCM 17653 [BBBN] 9118 9194 + Met CAT [ENA] ¡û
>C131002401 CP003249 Deinococcota Thermus oshimai JL-2 [CP003249] 1913567 1913643 + Met CAT [Ensembl] ¡û
>W1610651359 LJJR01000002 Deinococcota Thermus scotoductus [LJJR] 60537 60461 - Met CAT [ENA] ¡û
>W1710042146 BBBL01000018 Deinococcota Thermus kawarayensis JCM 12314 [BBBL] 3904 3980 + Met CAT [ENA] ¡û
>W1710042231 BBBN01000003 Deinococcota Thermus sp. JCM 17653 [BBBN] 9118 9194 + Met CAT [ENA] ¡û
>W1710514647 FNBC01000011 Deinococcota Thermus arciformis [FNBC] 3544 3620 + Met CAT [ENA] ¡û
Identical group No.288125 (4 seq.)
>WENV181229178 OFEJ01000992 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 5967 6043 + Ile2 CAT [ENA] ¢þ
>WENV181404376 OGCA01001189 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 2698 2622 - Ile2 CAT [ENA] ¢þ
>WENV181408630 OGCH01007104 [OGCH] hot springs metagenome; hot springs 1320 1396 + Ile2 CAT [ENA] ¢þ
>ENV09004156 ADKJ01000260 Hot springs metagenome ctg_1106445192081 803 880 + Met CAT [ENA] ¡û
Identical group No.541135 (1 seq.)
>ENV09004152 ADKJ01000117 Hot springs metagenome ctg_1106445192081 1245 1170 - Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK